| Protein: | l(1)G0232-PA |
| Organism: | Drosophila melanogaster |
| Length: | 827 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(1)G0232-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
558.0 | [0..29] | [827..4] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MQQTQWNKDR QEDRNNNSGS RSEQDSGCHR RLFLCIAKAV KQFIDLCNNL GANCSTTTAT 60
61 SPSTSSSSAS ST
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [73-433] |
1 11 21 31 41 51
| | | | | |
1 QNLIAVVPPQ LQQLQVQLPA PGGGGGAGAG GGGGGGGGAA PVRRHISHTT AVKFLYARKF 60
61 DIPRAVSLYE QHEQIRLKEY LYNIDPDVEP LRSELQTGKF TILPARTSSG AAIALFTANR 120
121 HSPLSVSHTT TLQGIVYQLD SALQDSETQR AGLVFIYDMS GSKYSNFDYD LSQKILTLLK 180
181 GGYPARLKKV LIVTAPLWFK APFKILRLFV REKLRERVFT VSVPQLALHV PRKALPIHLG 240
241 GTLEVDHATW LLSCRQSMTN REDELLANIV GVGGGSGSGS AAGSAAIVST NGTETEAATT 300
301 AATIISAVHQ LGDNNTTVVT VSNGVGPAGS ASGGATTAAS AATEPNENIT INGLSPSHRQ 360
361 A
|
| Detection Method: | |
| Confidence: | 42.522879 |
| Match: | 1o6uA |
| Description: | The Crystal Structure of Human Supernatant Protein Factor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.50711590439337 | bayes_pls_golite062009 |
| transporter activity | 2.25865143268098 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.10462277559464 | bayes_pls_golite062009 |
| vitamin binding | 2.0152397506122 | bayes_pls_golite062009 |
| retinal binding | 1.93254744702904 | bayes_pls_golite062009 |
| retinoid binding | 1.8165604084023 | bayes_pls_golite062009 |
| isoprenoid binding | 1.75796060899596 | bayes_pls_golite062009 |
| transcription regulator activity | 1.57333660473021 | bayes_pls_golite062009 |
| protein binding | 1.43563365816744 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.14391953556505 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.663226199389531 | bayes_pls_golite062009 |
| protein transporter activity | 0.338272481166365 | bayes_pls_golite062009 |
| lipid transporter activity | 0.292848105509111 | bayes_pls_golite062009 |
|
Region A: Residues: [434-516] |
1 11 21 31 41 51
| | | | | |
1 ANNSSSSSSS AATVANPLKL NTSGSADNNS TITNATTAAG AAGAAAGTTT NGGGEFWSEN 60
61 PPSSASSGFS DDDSLAGQEG DPK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [517-827] |
1 11 21 31 41 51
| | | | | |
1 PIDQIVQMVK QRGRHGLIKE YADIRNRAPE GTFLHARMRA NLTKNRYTDV LCYDHSRVVL 60
61 AHEDGDEPSD YINANFVDGY KQKNAYISTQ GPLPKTSQDF WRMIWEQHCL VIVMTTRVME 120
121 RGRVKCGQYW EPTEESSLEF GDYHVRTISV ECNEDYMVAS LELRNIKTDE IRNVSHWQFT 180
181 SWPDYGVPSS AMAMLNFLQK VREKQAQLVQ GLGDTWAGHP RGPPIVVHCS AGIGRTGTFI 240
241 TLDICISRLE DVGTADIRGT VEKIRSQRAY SIQMPDQYVF CHLALIEYAY SRGMLQTVDL 300
301 AGFDEREPDS E
|
| Detection Method: | |
| Confidence: | 94.0 |
| Match: | 2pa5A |
| Description: | No description for 2pa5A was found. |
