| Protein: | FBpp0298283, CG1... |
| Organism: | Drosophila melanogaster |
| Length: | 1056 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0298283, CG1....
| Description | E-value | Query Range |
Subject Range |
|
|
681.0 | [0..1] | [1056..1] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MSDIYYCSNS QMKKSRDADK SSATLSATNT NANAVNLSAA DKKNNNNNCS NRNKEKSMQA 60
61 NGKNWKGIVQ SNPNPSGGVG TTAQPPKVFH NTRCTRHHKP HHSHGNGSAA SAVGGAAGLA 120
121 NGPPMEATQQ RERERERDRD RERERERDRE RDREREREHQ LHMHQHNHGL RRKSESVLST 180
181 DSDIRFTRRK LGDGQKCGCA VIAGFLIALL VAGIFVYV
|
| Detection Method: |  |
| Confidence: | 0.961 |
| Match: | 1rh1A |
| Description: | crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [219-379] |
1 11 21 31 41 51
| | | | | |
1 GYTYFRPEPL PDRVFRGRFM VLNDKWSMEL ANQNSMRFQH KARDYRERIN LTLRRSDLRE 60
61 AYEGSEILAL DGSEDNNNIV VHFNMIFDPY AGLVSSGDLL ALFHEEMTQP PQQRRHFANM 120
121 TVDVASLSIK ETTGLIEEPI MSSSPLGGHD ETTEPVVTTT P
|
| Detection Method: | |
| Confidence: | 10.522879 |
| Match: | 1ijqA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [380-496] |
1 11 21 31 41 51
| | | | | |
1 APPRRCSPLE LSYCRQVGYN ITTYPNLLGH ASYEQLAEDV IVFRELVDGE CHREAYDFVC 60
61 RLLQPPCDTH GSDLQPTPGQ ICREYCESFM AGCGGRLPQR FRQFFDCERF PESTGTQ
|
| Detection Method: | |
| Confidence: | 38.0 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [497-1056] |
1 11 21 31 41 51
| | | | | |
1 SCHQKPHCVS DMQSNVQSPR LCDGYADCPD LSDERSCAFC SPNALYCGRG RACVPRKARC 60
61 DGKADCPDGA DEKDCLSIAP LAADLLQPEP LVPYLSRFHS AGYAVFSEKG VVGKLCAEGL 120
121 EGDAKLVVRQ TVSESLCKSL GYESVEIFDV QNDTERLNDY VRVLDPHAPE ISFIRTHCPR 180
181 RQVLYVGCGE LRCGVQSALF NAKQHLSLPK MSAPGDWPWL VALFREDIHV CDGTLITQDW 240
241 VLTTEGCFQG QPRATWMAIV GAVRLSAKAP WTQRRRIIGM IKSPVEGSTA ALVRLETPVS 300
301 YSDHVRPICL PDALQRRLLQ QPPAQRRSHV PVAERLEGQL VSQQRSRLSQ ENQQFFLIPS 360
361 QEQQDSSTEN QGDEDQDEQE DHFGGESAAS YMPKAEALHQ ELDGYPLPDH APQVNYYSSS 420
421 STVTSSSTAA RIATKAPILA AVPAAQEQIW TNCNTLGWSR QRDHLQRVQL KMGDMAPCEN 480
481 VSIATVNSMC MEATYQKYDC TQEEYSGAPV QCLIPGTNQW ALIGVSSWRI ACGPTGVERP 540
541 RMYDKIASNA AWIRETISAI
|
| Detection Method: | |
| Confidence: | 42.0 |
| Match: | 2f83A |
| Description: | No description for 2f83A was found. |
