| Protein: | fs(1)h-PB |
| Organism: | Drosophila melanogaster |
| Length: | 2038 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fs(1)h-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
755.0 | [0..1] | [2038..1] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MSSSEPPPRY EPPVEPVNGI VQPPVIPPAE RPGRNTNQLQ YLIKTVMKVI WKHHFSWPFQ 60
61 QPVDAKKLNL PDYHKIIKQP MDMGTIKKRL ENNYYWSAKE TIQDFNTMFN NCYVYNKPGE 120
121 DVVVMAQTLE KVFLQKIESM
|
| Detection Method: |  |
| Confidence: | 49.0 |
| Match: | 1x0jA |
| Description: | No description for 1x0jA was found. |
|
Region A: Residues: [141-308] |
1 11 21 31 41 51
| | | | | |
1 PKEELELEPV TAKGGKKKQR APATPKSSSG GAGASTGSGT SSAAVTSGPG SGSTKVSVAA 60
61 SSAQQSGLQG ATGAGGGSSS TPGTQPGSGA GGAIAARPVS AMGGTVSSTA GGAPSIPPIS 120
121 TMPPHTVPGS TNTTTTAMAG GVGGPGAAGA NPNAAALMAS LLNAGQTG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [309-448] |
1 11 21 31 41 51
| | | | | |
1 AYPGAPGQTA VNSSSLLDGS TAAVAAAAAA AAAAAAAAGG AAGAAGGAGT IPAVAVNAAN 60
61 AVQAYVNAGV SVGVDAVIPP QQPAKIKKGV KRKADTTTPT ANAFESPYTQ MDSKSAKIAT 120
121 RRESNRQDLT FQGSGYNMSP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [449-586] |
1 11 21 31 41 51
| | | | | |
1 LGVSGVPGLG GLVAGGVAGV AVAKNKEKLS DALKSCNEIL KELFSKKHSG YAWPFYKPVD 60
61 AEMLGLHDYH DIIKKPMDLG TVKRKMDNRE YKSAPEFAAD VRLIFTNCYK YNPPDHDVVA 120
121 MGRKLQDVFE MRYANIPD
|
| Detection Method: | |
| Confidence: | 52.69897 |
| Match: | 2ouoA |
| Description: | No description for 2ouoA was found. |
|
Region A: Residues: [587-967] |
1 11 21 31 41 51
| | | | | |
1 EPVANAAHHH GHGHGHGHGH GHGHGHGHGH GHGHGYGGSS SLKHDASDSS SEDSSDTENE 60
61 SNSDEERSAR LKMLESKLLG LQEEIRKLSE EASAKKKAKK KLKEKKKSIG GGSGSGSASH 120
121 HCHATGGGAN AGGAGGPGSG GHGSVSVPGG VGSLGPGGAG GANLNALLGG SLVGHGGAAV 180
181 AGGVPNVGAL HSQVHDVAMA FSQMAGGGAA AGAGFGAGVT AAGASSGGKA GTLAGALAAG 240
241 AAAGAGGTTA GSGSSKGAKS KGGRGAKGSG AGGVGASNNA AAGNAAGGAA GAAAGAGSVG 300
301 GVGGAGAAGG GNASKRAKGS SSAGAGGGVG GANASAGGAG ARGSSKKKPS QVMNFDSEEE 360
361 DTAKPMSYDE KRQLSLDINK L
|
| Detection Method: | |
| Confidence: | 28.30103 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [968-1067] |
1 11 21 31 41 51
| | | | | |
1 PGDKLGRVVH IIQNREPSLR DSNPDEIEID FETLKPSTLR ELESYVASCL RKKTHKKPSG 60
61 KSKDEQMAEK KQELEKRLQD VTGQLGASKK TAKKDESASS
|
| Detection Method: | |
| Confidence: | 11.39794 |
| Match: | 2j7tA |
| Description: | No description for 2j7tA was found. |
|
Region A: Residues: [1068-1240] |
1 11 21 31 41 51
| | | | | |
1 KVEAVQPANP VSSSSSSSDS SSSSSSDSSS SDSSDSEAGD GDERPPRKKK SRDSNGSNVN 60
61 NPSINVVMGG NLPSGALSPT TMLMGLDHVV NSNTPTSQMS NMLGNANPLT AAAMLNNNNK 120
121 TSLPGSNFGG APAPGNMMHA GAGVPVAGAA VSASTGQQHN KNGPNDLSKV QPG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1241-1620] |
1 11 21 31 41 51
| | | | | |
1 GPINAALPPH SFAGGTATVA TSQSSGGIRI ASNLHKPSGL GGGDLGEHHA ALAAALTSGI 60
61 NSTGTAGGGI NNNGGSNNNA NPLGGSHGDA MVNASLASLA SGLKQIPQFD DPVEQSLASL 120
121 EFSAGSTGKS GLTDNFLMQQ HLMQPAGPQQ QQQQQQQQPF GHQQQQQQQQ QQQQQQQQHM 180
181 DYVTELLSKG AENVGGMNGN HLLNFNLDMA AAYQQKHPQQ QQQQAHNNGF NVADFGMAGF 240
241 DGLNMTAASF LDLEPSLQQQ QMQQMQLQQQ HHQQQQQQTH QQQQQHQQQH HQQQQQQQLT 300
301 QQQLQQQQQQ QQQQQHLQQQ QHQQQHHQAA NKLLIIPKPI ESMMPSPPDK QQLQQHQKVL 360
361 PPQQSPSDMK LHPNAAAAAA
|
| Detection Method: | |
| Confidence: | 15.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1621-1739] |
1 11 21 31 41 51
| | | | | |
1 VASAQAKLVQ TFKANEQNLK NASSWSSLAS ANSPQSHTSS SSSSSKAKPA MDSFQQFRNK 60
61 AKERDRLKLL EAAEKEKKNQ KEAAEKEQQR KHHKSSSSSL TSAAVAQAAA IAAATAAAA
|
| Detection Method: | |
| Confidence: | 1.04 |
| Match: | 1rw6A |
| Description: | human APP core domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.225375777463061 | bayes_pls_golite062009 |
|
Region A: Residues: [1740-1822] |
1 11 21 31 41 51
| | | | | |
1 VTLGAAAAAA LASSASNPSG GSSSGGAGST SQQAITGDRD RDRDRERERE RSGSGGGQSG 60
61 NGNNSSNSAN SNGPGSAGSG GSG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1823-2038] |
1 11 21 31 41 51
| | | | | |
1 GGGGSGPASA GGPNSGGGGT ANSNSGGGGG GGGPALLNAG SNSNSGVGSG GAASSNSNSS 60
61 VGGIVGSGGP GSNSQGSSGG GGGGPASGGG MGSGAIDYGQ QVAVLTQVAA NAQAQHVAAA 120
121 VAAQAILAAS PLGAMESGRK SVHDAQPQIS RVEDIKASPG GQGQSSPAQQ SPQDRAAAKR 180
181 AEQRRAEQER RRREALAGQI DMNMQSDLMA AFEETL
|
| Detection Method: | |
| Confidence: | 1.23 |
| Match: | 1wckA |
| Description: | Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore. |
Matching Structure (courtesy of the PDB): |
|
