| Protein: | FBpp0309148, p115-PA |
| Organism: | Drosophila melanogaster |
| Length: | 836 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309148, p115-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
672.0 | [0..1] | [836..1] |
|
Region A: Residues: [1-464] |
1 11 21 31 41 51
| | | | | |
1 MEFLKSGIKT VLGSTEPGQQ PSAAETVEKL VDRVYSSTLL EDRRDACRAL KALSRKYRIE 60
61 VGAQGMPPLV QVLQNDGQDA EIISYALDTL CNVVTSEEFD EEADNPTVSV NVGEQFTEMF 120
121 IKTPEHVTLV MGYLDEYDFR VRRAAIQLIT SLISNKTREL QDLILVSPMG VSKLMDLLTD 180
181 SREVIRNDVL LLLIELTKGN SNIQKIVAFE NAFDRLFEIV REEGCSDGGI VVEDCLILLL 240
241 NLLKNNSSNQ QFFKEGSYIQ RLSPMFELSQ DAEEVGWSPQ KVSNFHCLLQ VVRALVTPSN 300
301 QQQVVAACQR VMQKSRLLHA LCEILMSSGV PADILTETIN AVAEVVRGDR DNQDELGRVM 360
361 APSSPPRPAI VVLLMSMINE KQLLALRCAV LYCFECFLYR NADGQRAVVQ TLLPSSASDV 420
421 SALSTGQLLC TGLFSTDALA NWFSAVALMH SLVENVALKE ELLR
|
| Detection Method: |  |
| Confidence: | 3.97 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.38363524631144 | bayes_pls_golite062009 |
| clathrin binding | 2.23233599894789 | bayes_pls_golite062009 |
| protein transporter activity | 1.84250643947717 | bayes_pls_golite062009 |
| protein binding | 1.81870125631028 | bayes_pls_golite062009 |
| transporter activity | 1.12250209220616 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.68280791022469 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.142369414135278 | bayes_pls_golite062009 |
|
Region A: Residues: [465-836] |
1 11 21 31 41 51
| | | | | |
1 VLLATPGGQK PITLLEQCTN LMQQERYRLQ SKVGLLMLLS LWLAHCPGAV KALLETQGTM 60
61 AYLTAQLCSN EHDEREFLVQ GMCAFLMGLC IQFNDNSLPG QKREDISQLI IKRIGQESFC 120
121 SKLAEVSRHE AYSRACKQAQ IRAKSAGELL LDFEYCKLYK GLEALIAKLV SGFDVDGIEL 180
181 TELTLSSEAS ALVSQYKGII RGMDAQIQAL QQSSKELEQE NAELKEKLGE EQSLKAQLLD 240
241 QNTLLKAQLG ASTGQVQSAQ GAEATPPNEE ELNAARYQAN MYFAENIRLT KELETLRQQL 300
301 SAEKQSADAA QDSLAAMQKD QEDLLELLAD QEAKLTRYEE AGSTNTLPTS NVAPSVPAAG 360
361 GGSPIPSGTA SR
|
| Detection Method: | |
| Confidence: | 39.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
