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View Structure Prediction Details

Protein: l(1)G0255-PA
Organism: Drosophila melanogaster
Length: 495 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(1)G0255-PA.

Description E-value Query
Range
Subject
Range
gi|19528365 - gi|19528365|gb|AAL90297.1| LD46083p [Drosophila melanogaster]
583.0 [0..1] [495..1]

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Predicted Domain #1
Region A:
Residues: [1-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLPLLQRST LRGVQQMTKP WAAIGSLRLA SQEFRVESDT FGELKVPADK YYGAQTMRSQ  60
   61 INFPIGGATE RMPKPVVQAM GILKKAAAEV NKEFGLDSKV SEAISKAADD VISGKLYDDH 120
  121 FPLVIWQTGS GTQSNMNVNE VISNRAIELL GGKLGSKTPV HPNDHVNKSQ SSNDTFPTAI 180
  181 HISVALELNN NLKPAIKTLH DALRAKSEEF KDIIKIGRTH TMDAVPLTLG QEFSGYAQQL 240
  241 AYAQERIDAC LPRVYELALG GTAVGTGLNT RKGFAEKCAA KIAELTSLPF VTAPNKFEAL 300
  301 AARDAMVEVH GVLNTIAVSL MKIANDIRFL GSGPRCGLGE LSLPENEPGS SIMPGKVNPT 360
  361 QCESLTMLSA QVMGNQVAVT IGGSNGHFEL NVFKPLIVSN VLRSIRLLSD GSRTFTANCV 420
  421 NGIQANRENI AKIMNESLML VTALNPHIGY DKAAKIAKTA HKNGTTLKEE AINLGYLTEQ 480
  481 QFNDWVRPEQ MLGPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 156.0
Match: 1yfmA
Description: RECOMBINANT YEAST FUMARASE
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle