YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ovo-PE, ovo-PB
Organism: Drosophila melanogaster
Length: 1351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ovo-PE, ovo-PB.

Description E-value Query
Range
Subject
Range
gi|109124151 - gi|109124151|ref|XP_001087503.1| PREDICTED: similar to zinc finger protein 91 [Macaca mulatta]
775.0 [0..735] [1349..269]

Back

Predicted Domain #1
Region A:
Residues: [1-61]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKIFLIKNR LHQQQQRLLE SQNLLQHKNQ DDERLVPPLS PSGSGSGPSP TPTSQPPPEP  60
   61 Q

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [62-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQGQQVLGQV PDSDQQPLSL TRKRFHHRRH YFGQSRHSLD HLNQNQSPNP NANANPNQIQ  60
   61 NPAELEVECA TGQVQNENFA AELLQRLTPN TATTAQNNIV NNLVNNSRAA TSVLATKDCT 120
  121 IENSPISIPK NQRAEDEEEQ EDQEKEKPAE REREKSDERT EQVEKEERVE REEEEDDEVD 180
  181 VGVEAPRPRF YNTGVVLTQA QRKEYPQEPK DLSLTIAKSS PA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [284-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPHIHSDSES DSDSDGGCKL IVDEKPPLPV IKPLSLRLRS TPPPADQRPS PPPPRDPAPA  60
   61 VRCSVIQRAP QSQLPTSRA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [363-734]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFLLPPLDQL GPEQQEPIDY HVPKRRSPSY DSDEELNARR LERARQVREA RRRSTILAAR  60
   61 VLLAQSQRLN PRLVRSLPGI LAAAAGHGRN SSSSSGAAGQ GFQSSGFGSQ NSGSGSSSGN 120
  121 QNAGSGAGSP GSGAGGGGGM GGGRDGRGNY GPNSPPTGAL PPFYESLKSG QQSTASNNTG 180
  181 QSPGANHSHF NANPANFLQN AAAAAYIMSA GSGGGGCTGN GGGGASGPGG GPSANSGGGG 240
  241 GGGGGNGYIN CGGVGGPNNS LDGNNLLNFA SVSNYNESNS KFHNHHHHHQ HNNNNNNNGG 300
  301 QTSMMGHPFY GGNPSAYGII LKDEPDIEYD EAKIDIGTFA QNIIQATMGS SGQFNASAYE 360
  361 DAIMSDLASS GQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.30103
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #5
Region A:
Residues: [735-814]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CPNGAVDPLQ FTATLMLSSQ TDHLLEQLSD AVDLSSFLQR SCVDDEESTS PRQDFELVST  60
   61 PSLTPDSVTP VEQHNTNTTQ 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [815-1025]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDVLHENLLT QLTHNIVRGG SNQQQQHHQQ HGVQQQQQQQ HSVQQQQQHN VQQQHGVQQQ  60
   61 HVQQQPPPSY QHATRGLMMQ QQPQHGGYQQ QAAIMSQQQQ QLLSQQQQQS HHQQQQQQQH 120
  121 AAAYQQHNIY AQQQQQQQQQ HHQQQQQQQH HHFHHQQQQQ PQPQSHHSHH HGHGHDNSNM 180
  181 SLPSPTAAAA AAAAAAAAAA AAAAHLQRPM S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1026-1157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSSSGGTNS SNSSGGSSNS PLLDANAAAA AAAALLDTKP LIQSLGLPPD LQLEFVNGGH  60
   61 GIKNPLAVEN AHGGHHRIRN IDCIDDLSKH GHHSQHQQQQ GSPQQQNMQQ SVQQQSVQQQ 120
  121 QSLQQQQQQQ HH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1158-1351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QHHSNSSASS NASSHGSAEA LCMGSSGGAN EDSSSGNNKF VCRVCMKTFS LQRLLNRHMK  60
   61 CHSDIKRYLC TFCGKGFNDT FDLKRHTRTH TGVRPYKCNL CEKSFTQRCS LESHCQKVHS 120
  121 VQHQYAYKER RAKMYVCEEC GHTTCEPEVH YLHLKNNHPF SPALLKFYDK RHFKFTNSQF 180
  181 ANNLLGQLPM PVHN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.69897
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle