| Protein: | CG6927-PA |
| Organism: | Drosophila melanogaster |
| Length: | 524 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6927-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
386.0 | [0..27] | [523..96] |
|
Region A: Residues: [1-370] |
1 11 21 31 41 51
| | | | | |
1 MEWSLIISIL LNCLYASASA LDEDCPTLDD GDSLSQTQLL DRLTHGCRYD RLERPITYSE 60
61 TGQRLPVDVY MRAYIYFMQN LEAHDLQFKI YALLQMRYLD PRLNFRNVSP KRRQPILGEE 120
121 HLRNSLWMPH IFLANERDSS ILGLTEKDIL TSISPDGTVI VSNRIKATLY CWLNLKKFPF 180
181 DEQHCSTVLE SWMYNTSELV LHWEQKRPIT YDGALHLTEF VLQRSWSNET VINADLSDLR 240
241 HGAFAGNYSS LSFTVHLTRV VGFYLMDYFL PSMLIVAISW VSFWLQADQA PPRITLGTST 300
301 LLTFITLASA QGKTLPKVSY IKVSEVWFLG CTIFIFGSMV EFAFVNTIWR RKKSVPVKKL 360
361 NSKHILKSTL
|
| Detection Method: |  |
| Confidence: | 69.522879 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [371-524] |
1 11 21 31 41 51
| | | | | |
1 SPNLLRRRSH ARSRSFSGTA LHKTADTGSL GGAGFNNYLT VNLPITTIKE GQVLDQQRTS 60
61 RVVQKMDVNF VESAFGSMGS AQSTGAISAA SSSQTLTNNN RTESAGHQEE IDLSGWTTLT 120
121 PQEIAMWIDS RARFVFPLSF LVFNLFFWTF VYCI
|
| Detection Method: | |
| Confidence: | 37.09691 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
