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View Structure Prediction Details

Protein: FBpp0307831, Fas2-PA
Organism: Drosophila melanogaster
Length: 873 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307831, Fas2-PA.

Description E-value Query
Range
Subject
Range
Dscam-PAJ - The gene Down syndrome cell adhesion molecule is referred to in FlyBase by the symbol Dmel\Dscam (CG...
518.0 [0..1] [871..393]

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Predicted Domain #1
Region A:
Residues: [1-719]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGELPPNSVG VFLALLLCSC SLIELTRAQS PILEIYPKQE VQRKPVGKPL ILTCRPTVPE  60
   61 PSLVADLQWK DNRNNTILPK PNGRNQPPMY TETLPGESLA LMITSLSVEM GGKYYCTASY 120
  121 ANTEILEKGV TIKTYVAITW TNAPENQYPT LGQDYVVMCE VKADPNPTID WLRNGDPIRT 180
  181 TNDKYVVQTN GLLIRNVQES DEGIYTCRAA VIETGELLER TIRVEVFIQP EIISLPTNLE 240
  241 AVEGKPFAAN CTARGKPVPE ISWIRDATQL NVATADRFQV NPQTGLVTIS SVSQDDYGTY 300
  301 TCLAKNRAGV VDQKTKLNVL VRPQIYELYN VTGARTKEIA ITCRAKGRPA PAITFRRWGT 360
  361 QEEYTNGQQD DDPRIILEPN FDEERGESTG TLRISNAERS DDGLYQCIAR NKGADAYKTG 420
  421 HITVEFAPDF SHMKELPPVF SWEQRKANLS CLAMGIPNAT IEWHWNGRKI KDLYDTNLKI 480
  481 VGTGPRSDLI VHPVTRQYYS GYKCIATNIH GTAEHDMQLK EARVPDFVSE AKPSQLTATT 540
  541 MTFDIRGPST ELGLPILAYS VQYKEALNPD WSTAYNRSWS PDSPYIVEGL RPQTEYSFRF 600
  601 AARNQVGLGN WGVNQQQSTP RRSAPEEPKP LHNPVQHDKE EPVVVSPYSD HFELRWGVPA 660
  661 DNGEPIDRYQ IKYCPGVKIS GTWTELENSC NTVEVMETTS FEMTQLVGNT YYRIELKAH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.39794
Match: 1e07A
Description: Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [720-873]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NAIGYSSPAS IIMKTTRGID VIQVAERQVF SSAAIVGIAI GGVLLLLFVV DLLCCITVHM  60
   61 GVMATMCRKA KRSPSEIDDE AKLGSGQLVK EPPPSPLPLP PPVKLGGSPM STPLDEKEPL 120
  121 RTPTGSIKQN STIEFDGRFV HSRSGEIIGK NSAV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.0
Match: 1fnfA
Description: FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle