| Protein: | gi|22831636, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 595 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22831636, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
284.0 | [0..1] | [578..1] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MGNSVTPASN TTSLPTSTPS VTTSPPASTD FMLLAAAATS ATSATPATAT SAAATAASNP 60
61 AKRKLSSIAE IPSKFLVVSD AKGVYSAHTH PNGFAADSLG VDNNETMIKK LMQNLQSQRQ 120
121 QQSLQQLRSL RPAEISLTP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [140-258] |
1 11 21 31 41 51
| | | | | |
1 PPAATRKVDI SNSRTRSYSL SNVSAARDQQ DHPQHQQHAN HMQIQQHYGY MRSNIGGVIY 60
61 GLHKDSADSA ASSACGAGAG AAAVGMSIAS SAPAAGSQLS AHHHTGHGGR RRTTSSNSN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [259-343] |
1 11 21 31 41 51
| | | | | |
1 GAGTREVHNK LEKERRAQLK ECYDLLKKVL PMGDEDRKKT SNLTILDTAH KYVNSLSHEV 60
61 CEQEAKIEKL AKQKIELQKR LKQLS
|
| Detection Method: | |
| Confidence: | 22.39794 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
|
Region A: Residues: [344-595] |
1 11 21 31 41 51
| | | | | |
1 LRRESPPTDQ QIIPQADKVC LATTATTAPP TAASGHNGTT ILFDAGNACA TGQLTTVINK 60
61 TNGGATAAAS SKHNGNHTGG ATTTLTPAMG IMTIKNGNGS NGNMLAISPT GGHNHQLHQH 120
121 HNGSPAGSPS GIGATTGATI TRGSPTPSTP SPSPSSSSSG VSLSTSFMGG SSSSSSSSSS 180
181 SSSSSSSSSS SSPTQQQQII TPTATARSVG LKFHGGAGAA VPAGGGSVNG FHQADKDRNY 240
241 TFLRLSAGTT AQ
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
