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View Structure Prediction Details

Protein: dnc-PF
Organism: Drosophila melanogaster
Length: 662 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dnc-PF.

Description E-value Query
Range
Subject
Range
dnc-PB, FBpp0305507 - The gene dunce is referred to in FlyBase by the symbol Dmel\dnc (CG32498, FBgn0000479). It is a prot...
749.0 [0..3] [662..550]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKNSASSQ SLPRVHSFFN MIPSIMQDDL ALTILNDRDN MFSIKSQRSH GEDLIVTPFA  60
   61 QILASLRSVR NNLLSLTNVP ASNK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRRPNQSSSA SRSGNPPGAP LSQGEEAYTR LATDTIEELD WCLDQLETIQ THRSVSDMAS  60
   61 LKFKRMLNKE LSHFSESSRS GNQISEYICS TFLDKQQEFD LPSLRVEDNP ELVAANAAAG 120
  121 QQSAGQYARS RSPRGPPMSQ ISGVK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [230-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPLSHTNSFT GERLPTFGVE TPRENELGTL LGELDTWGIQ IFSIGEFSVN RPLTCVAYTI  60
   61 FQSRELLTSL MIPPKTFLNF MSTLEDHYVK DNPFHNSLHA ADVTQSTNVL LNTPALEGVF 120
  121 TPLEVGGALF AACIHDVDHP GLTNQFLVNS SSELALMYND ESVLENHHLA VAFKLLQNQG 180
  181 CDIFCNMQKK QRQTLRKMVI DIVLSTDMSK HMSLLADLKT MVETKKVAGS GVLLLDNYTD 240
  241 RIQVLENLVH CADLSNPTKP LPLYKRWVAL LMEEFFLQGD KERESGMDIS PMCDRHNATI 300
  301 EKSQVGFIDY IVHPLWETWA DLVHPDAQDI LDTLEENRDY YQSMIPPSPP PSGVDENPQE 360
  361 DRIRFQVTLE ESDQENLAEL EEGDESGGES TTTGTTGTTA ASALSGAGGG GGGGGGMAPR 420
  421 TGGCQNQPQH GGM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 130.0
Match: 2fm0A
Description: No description for 2fm0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle