| Protein: | trr-PD |
| Organism: | Drosophila melanogaster |
| Length: | 2431 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for trr-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
1156.0 | [0..1] | [2431..1] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MNIPKVTTSL GAAEKAKPER VASVAAAAFN AVSLQKRSGD DTATPAEDPT RKKAKTELLL 60
61 GTGTAAPSLP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [71-263] |
1 11 21 31 41 51
| | | | | |
1 AKASSTAPQQ LLYQRSGQQA KAQVKAASEP QDVETADGVW DARDQQIIVC NFGSGTEMGA 60
61 IKAEDADKQS EYRISTPRNS QSNPLLHRNT AFTSFTKKEG ASSSASSSSS TASVISIEPS 120
121 GSGQDHAENS GKSEDLDYVL MPASGADSST SVGNSTGTGT PAGTPIGATT STIILNANNG 180
181 TAGVSGAGTT TIL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [264-405] |
1 11 21 31 41 51
| | | | | |
1 TQKSGHTNYN IFNTTATGSQ TPTTTLLNRV NLHPKMKTQL MVNAKKLSEV TQTTAKVSIG 60
61 NKTISVPLLK PLMSASGAAT AGGATIVESK QLLQPGGQVT TVMSAAQQSG GQQVHPHVHS 120
121 HAHHNFTKLI KRGPKNSGTI VS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [406-589] |
1 11 21 31 41 51
| | | | | |
1 FSGLQIKPAN TKIVATKVVS KKMLQLQQHQ QQIQQQQQLQ QLQVTSGGGL APPTGSIVTI 60
61 TTTNPSQTYA MVQDSATVGP AAHSEDDAPA PRKITAYSEN LQKILNKSKS QESTGGPEEF 120
121 TNINSVVIKP LDKNTLNCPP SFNIFKQQQH SQAAQSQSIS AVGSGAGTPV TFTMASGNAS 180
181 DLAT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [590-828] |
1 11 21 31 41 51
| | | | | |
1 TSTVSVSAGT ICINSPMMGT RPIISIQNKN ISLVLSKTTM AQQKPKMITT TTLSSQAALQ 60
61 MHHALIQDSS ADKAGSSANS GSATSGASMQ LKLTTANTPT KLSVSLAPDV VKLEEVGSES 120
121 KAKLLVKQEA VVKDSTGTPT SEERAEEIGT PEKRLNANAT MTAINQVQNQ SANQIQMATS 180
181 TSTASNPSTP NPTVNATPMN NQRSAAEDNA LLKQLLQNNS SSHSLNQISI TSAHVGSAS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [829-1050] |
1 11 21 31 41 51
| | | | | |
1 ASAPLSARKV INVRAPSMGK VRSLEDQLAR PVIPPVPTAT QAAGSSSSSG SVATSTTTTT 60
61 VASGGSSQQV ATASATALPV SAVAITTPGV GGEAKLEQKS DQPAAIMQNQ SQNQAPPPPP 120
121 PPQQQQQQQL HQPQQLQPSP HQVKQTVQIV SKETSFISGP VAAKTLVTEA TSKPAELLPP 180
181 PPYEMATAPI SNVTISISTK QAAPKELQMK PKAVAMSLPM EQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1051-1133] |
1 11 21 31 41 51
| | | | | |
1 GDESLPEQAE PPLHSEQGAT AAGVAPHSGG PLVSAQWTNN HLEGGVATTK IPFKPGEPQK 60
61 RKLPMHPQLD EKQIQQQAEI PIS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1134-1351] |
1 11 21 31 41 51
| | | | | |
1 TSLPTTPTGQ GTPDKVQLIS AIATYVKKSG VPNEAQPIQN QSQGQVQMQA QMQATMQGHL 60
61 SGQMSGQISG HAAGQIPAQM HLQVQHQLHM AVHPQQQQQQ LHQNQPQNAT IPLPVTGQGA 120
121 VPIPVPTMES KAGDQRKRRK REVQKPRRTN LNAGQAGGAL KDLTGPLPAG AMVQLAGMPP 180
181 GTQYIQGAAS GTGHVITSTG QGVTLGGVGA STGASSSP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1352-1454] |
1 11 21 31 41 51
| | | | | |
1 MLKKRVRKFS KVEEDHDAFT EKLLTHIRQM QPLQVLEPHL NRNFHFLIGS NETSGGGSPA 60
61 SMSSAASAGS SSAGGGKLKG GSRGWPLSRH LEGLEDCDGT VLG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1455-1590] |
1 11 21 31 41 51
| | | | | |
1 RYGRVNLPGI PSLYDSERFG GSRGLVGGSA RTRSPSPAES PGAEKMLPMS SIQNDFYDQE 60
61 FSTHMERNPR ERLVRHIGAV KDCNLETVDL VESEGVAAWA TLPRLTRYPG LILLNGNSRC 120
121 HGRMSPVALP EDPLTM
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1591-1669] |
1 11 21 31 41 51
| | | | | |
1 RFPVSPLLRS CGEELRKTQQ MELGMGPLGN NNNNNYQQKN QNVILALPAS ASENIAGVLR 60
61 DLANLLHLAP ALTCKIIED
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1670-1843] |
1 11 21 31 41 51
| | | | | |
1 KIGNKLEDQF MNQDDEKHVD FKRPLSQVSH GHLRKILNGR RKLCRSCGNV VHATGLRVPR 60
61 HSVPALEEQL PRLAQLMDML PRKSVPPPFV YFCDRACFAR FKWNGKDGQA EAASLLLQPA 120
121 GGSAVKSSNG DSPGSFCASS TAPAEMVVKQ EPEDEDEKTP SVPGNPTNIP AQRK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1844-2024] |
1 11 21 31 41 51
| | | | | |
1 CIVKCFSADC FTTDSAPSGL ELDGTAGAGT GAGPVNNTVW ETETSGLQLE DTRQCVFCNQ 60
61 RGDGQADGPS RLLNFDVDKW VHLNCALWSN GVYETVSGAL MNFQTALQAG LSQACSACHQ 120
121 PGATIKCFKS RCNSLYHLPC AIREECVFYK NKSVHCSVHG HAHAGITMGA GAGATTGAGL 180
181 G
|
| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 2jm1A |
| Description: | No description for 2jm1A was found. |
|
Region A: Residues: [2025-2133] |
1 11 21 31 41 51
| | | | | |
1 GSVADNELSS LVVHRRVFVD RDENRQVATV MHYSELSNLL RVGNMTFLNV GQLLPHQLEA 60
61 FHTPHYIYPI GYKVSRYYWC VRRPNRRCRY ICSIAEAGCK PEFRIQVQD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [2134-2431] |
1 11 21 31 41 51
| | | | | |
1 AGDKEPEREF RGSSPSAVWQ QILQPITRLR KVHKWLQLFP QHISGEDLFG LTEPAIVRIL 60
61 ESLPGIETLT DYRFKYGRNP LLEFPLAINP SGAARTEPKQ RQLLVWRKPH TQRTAGSCST 120
121 QRMANSAAIA GEVACPYSKQ FVHSKSSQYK KMKQEWRNNV YLARSKIQGL GLYAARDIEK 180
181 HTMIIEYIGE VIRTEVSEIR EKQYESKNRG IYMFRLDEDR VVDATLSGGL ARYINHSCNP 240
241 NCVTEIVEVD RDVRIIIFAK RKIYRGEELS YDYKFDIEDE SHKIPCACGA PNCRKWMN
|
| Detection Method: | |
| Confidence: | 66.09691 |
| Match: | 2r3aA |
| Description: | No description for 2r3aA was found. |
