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View Structure Prediction Details

Protein: FBpp0307920
Organism: Drosophila melanogaster
Length: 655 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307920.

Description E-value Query
Range
Subject
Range
FBpp0300913, CG3... - This gene is referred to in FlyBase by the symbol Dmel\CG3638 (CG3638, FBgn0261444). It is a protein...
549.0 [0..1] [655..1]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQPSILVKI LHSIPHVNYT FRRVNDTFNP DSDVYLEPTN NKLQCQQKGI ELQSLVILAS  60
   61 IPAGLLIGSL LGLLLYLLTR CCDRRQRKPS AQRCQSCSLV IITLMTCAAI GLGLYGNDDF 120
  121 HNGLLQAFGS GKSVEGLVLT 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [141-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKRQTESIKH DLETRMAGHK VEQLVEKPHY NQTVVMLLIE TSRLVTENTS RAVASLDSMV  60
   61 HYFMKAKGSE NDTSLMGLLQ LGEFYESIRW PATLAFLTVL LLLCTVLVIG VARRSRCTLI 120
  121 FFSVSGLFCI IICWLLAGVY LASSVAAGDF CMRPHDYMCR QVGMRSPYVD FLNCGTPRNR 180
  181 FILRLNESRD LVDRARESVE HMQRMSQETY PHI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [354-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIQRTLNAMD NDLEITLRNL TTLSATLDRR TIDMHYEEAL RGLCGGGLLG LSLMMVAGLL  60
   61 TSFLLTILVY ADSHAWIYLT KR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [436-655]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTLDADKSET APLFPASNAP SASISPTAPL STGTINRTLL HHQQASSGGG SGTLPGSGGG  60
   61 AGAGGGVGAN GHNGVGPYRN GSAGLRQGLA SPSSQSSHTS STATYNNGTT SYHNSHQQHN 120
  121 NHLYSNHYSH SNNHYNNTQH RTNPAAGAVA AAVGVVSSGQ RSPSPPPVYD LVHGTRSGHH 180
  181 TLGRLPSHHQ QSATYLPGPN NGKYATLSKQ CKTLESNDFY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle