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View Structure Prediction Details

Protein: FBpp0307920
Organism: Drosophila melanogaster
Length: 655 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307920.

Description E-value Query
Range
Subject
Range
FBpp0300913, CG3... - This gene is referred to in FlyBase by the symbol Dmel\CG3638 (CG3638, FBgn0261444). It is a protein...
549.0 [0..1] [655..1]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQPSILVKI LHSIPHVNYT FRRVNDTFNP DSDVYLEPTN NKLQCQQKGI ELQSLVILAS  60
   61 IPAGLLIGSL LGLLLYLLTR CCDRRQRKPS AQRCQSCSLV IITLMTCAAI GLGLYGNDDF 120
  121 HNGLLQAFGS GKSVEGLVLT 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [141-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKRQTESIKH DLETRMAGHK VEQLVEKPHY NQTVVMLLIE TSRLVTENTS RAVASLDSMV  60
   61 HYFMKAKGSE NDTSLMGLLQ LGEFYESIRW PATLAFLTVL LLLCTVLVIG VARRSRCTLI 120
  121 FFSVSGLFCI IICWLLAGVY LASSVAAGDF CMRPHDYMCR QVGMRSPYVD FLNCGTPRNR 180
  181 FILRLNESRD LVDRARESVE HMQRMSQETY PHI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [354-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIQRTLNAMD NDLEITLRNL TTLSATLDRR TIDMHYEEAL RGLCGGGLLG LSLMMVAGLL  60
   61 TSFLLTILVY ADSHAWIYLT KR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [436-655]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTLDADKSET APLFPASNAP SASISPTAPL STGTINRTLL HHQQASSGGG SGTLPGSGGG  60
   61 AGAGGGVGAN GHNGVGPYRN GSAGLRQGLA SPSSQSSHTS STATYNNGTT SYHNSHQQHN 120
  121 NHLYSNHYSH SNNHYNNTQH RTNPAAGAVA AAVGVVSSGQ RSPSPPPVYD LVHGTRSGHH 180
  181 TLGRLPSHHQ QSATYLPGPN NGKYATLSKQ CKTLESNDFY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle