| Protein: | CG3708-PA |
| Organism: | Drosophila melanogaster |
| Length: | 375 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3708-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
338.0 | [0..8] | [357..1] |
|
Region A: Residues: [1-375] |
1 11 21 31 41 51
| | | | | |
1 MLPNFEVIAP NCTMIGMADS AEGVTQEDSH TESRADGISG SLRSLGTYTQ ESTEPALSPA 60
61 DLPARSRKAF LRHMIGQLAE PVQNRIRALR HNQLQQVRIS EQFFREVYEL ERRFYGQSCA 120
121 LFDARRDILE GSVEPPIQTE KTWPEDPQDA LYLDFGNNEE LRQLRQKLAP VSPTTLGVPR 180
181 FWLTVFQNVP LLSELVQDHD EPLLESLMDV RLAYDQDSYM VIFQFRPNSF LHDSSLLLTK 240
241 RYFLQHSADP EYPFLFEGPE IVRCEGCHIH WRDGSNLTLQ TVESRRRNRA HRVTKVMPRE 300
301 SFFRFFAPPQ ALDLSLADEK TKLILGNDFE VGFLLRTQIV PKAVLFYTGD LVDSLSAASP 360
361 DSRSLSSEAE QEQVL
|
| Detection Method: |  |
| Confidence: | 54.522879 |
| Match: | 2ayuA |
| Description: | The structure of nucleosome assembly protein suggests a mechanism for histone binding and shuttling |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone binding | 4.83364158381373 | bayes_pls_golite062009 |
| binding | 2.67502047678266 | bayes_pls_golite062009 |
| DNA binding | 1.77868687163103 | bayes_pls_golite062009 |
| nucleic acid binding | 1.77336286476068 | bayes_pls_golite062009 |
| protein binding | 1.58681138679309 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0196905966923535 | bayes_pls_golite062009 |
