| Protein: | Rbf-PA |
| Organism: | Drosophila melanogaster |
| Length: | 845 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rbf-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1000.0 | [0..1] | [797..1] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MSEPDPQELG AEVVSGLVAT SDDRLEMINA EYTNLCRDLN MDRQTELQGY ETYLEVSQRC 60
61 SMEGTASHWM CCAIYTACRR TSTPTVTGQN AVVKGNCVSL NNLLRCCKMS IYEFKTKIKQ 120
121 WCDMANLPQE FVNEIEDLDR KFSITFMLHK RFRIIMDMIF SCPPNEKKHS KYI
|
| Detection Method: |  |
| Confidence: | 13.0 |
| Match: | 1aisB |
| Description: | Transcription factor IIB (TFIIB), core domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [174-240] |
1 11 21 31 41 51
| | | | | |
1 SLHGNHAHGK CSYIKLDDIC WRLFLCAKNQ KPSNTVDLVT SYNLMICCID LIYNNVLAEK 60
61 RTDLINP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [241-372] |
1 11 21 31 41 51
| | | | | |
1 KFEGLPSNWT ELDFRHNPHC ILSNFCDMTE EAKAMKATTF RQIMSSFFQA STIYGNKDTM 60
61 LGLLANENFE RNLKSLNISY EQYVLSVGEF DERILSAYDA GEHTALNDQS LRPPVTPLTR 120
121 KQDLPAQPAM AG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [373-772] |
1 11 21 31 41 51
| | | | | |
1 DKFEPVRNAT NNVKQLSAFG RITEPTDFVK QAGEEVIAKL LSIIEEIEQK FLAKYPSTEA 60
61 KSRFQLAKSF FFYLLDQILQ AEIRNKPDID LKRLLVQKVS LVIFNITLMA CCVELVLEAY 120
121 KTELKFPWVL DCFSISAFEF QKIIEIVVRH GSHEGCLNRS LIKHLNSIEE TCLERLAWAR 180
181 NSTVWEMIAS AQLPLPTWLM VNLDRAAGPL QIFLRKVYLL GWLRIQKLCS ELSLCEKTPE 240
241 SIWHIFEHSI THETELMKDR HLDQNIMCAI YIYIRVKRME DPKFSDIMRA YRNQPQAVNS 300
301 VYREVFIDIN EDGEPKVKDI IHFYNHTYVP LMRQFVIDYL NVTPDVSGRA SDLQLSPHPK 360
361 ERAAQPKKVT QSHSLFVSQM SKNEIQQSPN QMVYSFCRSP
|
| Detection Method: | |
| Confidence: | 118.0 |
| Match: | 2r7gA |
| Description: | No description for 2r7gA was found. |
|
Region A: Residues: [773-845] |
1 11 21 31 41 51
| | | | | |
1 AKDLQAMNEK VRGGKRMLSF GDEPGLGTMA ETKRSKISQV KAVMDDPELQ SAEQQTAVTT 60
61 EGCVGGEGGE HET
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
