| Protein: | MED26-PA, MED26-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1483 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED26-PA, MED26-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
1374.0 | [0..310] | [1483..1] |
|
Region A: Residues: [1-362] |
1 11 21 31 41 51
| | | | | |
1 MNQIEIQELT THLSQALDQN YDVVNMDAVL CVICALEGTT ITKEQLEATR LAKYINQLRR 60
61 RTKNEHLARR AKSLLKKWRE MVGIQQTATE NLAHPSQISS SQPALDLVKS PITSFITEPI 120
121 APSQQIVSDL HSNIDSAEPP LSGEHTLLHP NFSNLVNSIK DSDRHENIAI TTLHTHKDRR 180
181 HSHSIRSCHV ASPQPIVIDH SVNSVINLTD DSTVKINEAS VVIDIASDSD ENDNNGSLNP 240
241 KKLNSIVPAP LPIPSTPSSR QRKLKKEKRS KEREGQVATN TRFGAKASDG FQQAALTTDS 300
301 EIFSLSNSSM SSIVSGDATS SYSQNKSRLN SNELTFTGRF KAVDHLFRST ESGKHKIDEY 360
361 SA
|
| Detection Method: |  |
| Confidence: | 15.30103 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [363-538] |
1 11 21 31 41 51
| | | | | |
1 YDSNASCSRL SPSTVDEVKK AEHLFDAQLT NTTANQIPMS AVSIGYESNT RHEYLESDSP 60
61 SQIPKRRGRK KGSKGVDALI AKESSSLSQQ IFFGGSTVKK VKTTKELFNE IQSRKLSVSM 120
121 QSSASNLSNS STNRDLPSHT TFPRQTSSCS DTSMNSPHIL ETLSGSAIFA SKIDDL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [539-777] |
1 11 21 31 41 51
| | | | | |
1 GNTDSDTVTS DPSHDSNKSQ EIKECTSLDS NSNSIQSLPL ANNRENLIPT NVNDITTQLM 60
61 HLIHSLNSPL SEIEIERVYQ EKIIPCTCIV IEGVQGTLGE SNNSTLDEQS YNAKISLNSK 120
121 DNLSCHNQDN YSTSQRSVNG EVIDTQPKLV KSIFDLDFDD NDDPLYFIMD EIQKPIARAD 180
181 ELKNNKSDTK NINFGASAQN ASLNIIHFND DAQQDNSNQE RGKNETQNAI PAFTVHEDP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [778-1008] |
1 11 21 31 41 51
| | | | | |
1 DCLARQRFYI QTNKVTSFHI NALHNYYIPN INGNWDSVES FTSFQSEHTI MDTMESYTVT 60
61 NGADVVPKYG LLTSDRIRKD LSSLKSIKPY RVKNFTSLIS PFLGVAKCLP TCRRARRRFK 120
121 NFVNSSTAND KISNNFESLE NMKTSFKNCN PLNVKIDGTT SAIYSHNENH VPMQVNTNVE 180
181 QLPPSQSFSS NAISYNLLKL ADDKVCHDGI SDKSSNTGCQ GNSPYSSSSS S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1009-1141] |
1 11 21 31 41 51
| | | | | |
1 SYSGRKEDQH IITKNLQNKN IQLNSRKSDM KRRKRIYLEN DSKKKKHYRK RIKTAVNRTF 60
61 SNLHRNLYSI DSENGMKNDY KNEYGNSNNE EYAIVQRPAG DGENCSNHIV LTIKKTPSKI 120
121 NSPANSMTAF SPP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1142-1370] |
1 11 21 31 41 51
| | | | | |
1 STSDGANLQK SILDLRLEDT NISQSITEIP QKKDLSKTDR IVHQSRSSAY RRIFRKPDKS 60
61 QTKFIDLDLK HLFHLKANSP CISANAKLHN KLFFPHELSR DNTSGIRERL INYSSSSSSS 120
121 YDDDSEVENT SFLKKANVNK FSASNNRNLK TETETCAATA ISEFKFESDE DSILTSLGDS 180
181 DIDIQDEIQV INDKVDYCND FQNNKMLESF NSIFVDSLRT NTKNASDNM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1371-1483] |
1 11 21 31 41 51
| | | | | |
1 GSSAHITSLE SLKPENADAI TRYCNNNNLG VNLSNELSNI SAKPLKSFDS TMKLPSLGIE 60
61 HCTGIKTSSD MASTNIAEKK LTRIQQFKEW HQVLQLRSYN NEPLIVLPYV LLE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
