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View Structure Prediction Details

Protein: myoglianin-PD, m...
Organism: Drosophila melanogaster
Length: 598 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for myoglianin-PD, m....

Description E-value Query
Range
Subject
Range
gi|4580679 - gi|4580679|gb|AAD24472.1|AF132814_1 myoglianin [Drosophila melanogaster]
516.0 [0..1] [598..1]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLANSCCGWR KYKTHDQHHR TLKKKTRQNT SDTTVHIEVN SNEIQFPGSY RFNLDSKKIN  60
   61 IGRMNILGHK RGNFRVTRYV TVTVLLILST AVNAYAQPEN KSFSNSSNND SPEMVMLSNE 120
  121 TNNSAKVLSE KNGSSSISAD DKINENMGIF QMKVQSKPGK KSTPLAKVSE HG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLSRVQSVSL YRNTLINIES MLQRQLREKA KVDSIESIKM HILMRLNLKK LPNITKPISV  60
   61 PQNIIDNFYR DYNASSKTTV WNRMESIDES HLSINDTYGD HIMTDFFDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [282-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSSQMQGDD ANTVNEFLID LNKNQAKKSD IPINTNDEEY ESILSHISSI YIFPEEIQPH  60
   61 VRHNRKVDVF RFQIDSSYSD LSYATLHLYL RGWDWISAHQ PGLLEEIKKQ PRKDIVVTIH 120
  121 RAIRVANTTS FNPKVKMFEF RHSIPSGLGQ WVAVDLKSLL GNL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [445-598]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSNMTQEILI KGAETWMKSL VVTTDNTSKN PLTVHIEIGS QKKHRRKRSV YMDCTENDHD  60
   61 MRCCRYPLKV NFTSFGWHFV VAPTSFDAYF CSGDCKVGYL EQYPHTHLAA LTTSATPCCS 120
  121 PTKMSSLSLL YFDDNHNLVL SVIPNMSVEG CSCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.0
Match: 1bmpA
Description: BONE MORPHOGENETIC PROTEIN-7
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
pattern binding 0.90497366619649 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle