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View Structure Prediction Details

Protein: myoglianin-PD, m...
Organism: Drosophila melanogaster
Length: 598 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for myoglianin-PD, m....

Description E-value Query
Range
Subject
Range
gi|4580679 - gi|4580679|gb|AAD24472.1|AF132814_1 myoglianin [Drosophila melanogaster]
516.0 [0..1] [598..1]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLANSCCGWR KYKTHDQHHR TLKKKTRQNT SDTTVHIEVN SNEIQFPGSY RFNLDSKKIN  60
   61 IGRMNILGHK RGNFRVTRYV TVTVLLILST AVNAYAQPEN KSFSNSSNND SPEMVMLSNE 120
  121 TNNSAKVLSE KNGSSSISAD DKINENMGIF QMKVQSKPGK KSTPLAKVSE HG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLSRVQSVSL YRNTLINIES MLQRQLREKA KVDSIESIKM HILMRLNLKK LPNITKPISV  60
   61 PQNIIDNFYR DYNASSKTTV WNRMESIDES HLSINDTYGD HIMTDFFDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [282-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSSQMQGDD ANTVNEFLID LNKNQAKKSD IPINTNDEEY ESILSHISSI YIFPEEIQPH  60
   61 VRHNRKVDVF RFQIDSSYSD LSYATLHLYL RGWDWISAHQ PGLLEEIKKQ PRKDIVVTIH 120
  121 RAIRVANTTS FNPKVKMFEF RHSIPSGLGQ WVAVDLKSLL GNL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [445-598]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSNMTQEILI KGAETWMKSL VVTTDNTSKN PLTVHIEIGS QKKHRRKRSV YMDCTENDHD  60
   61 MRCCRYPLKV NFTSFGWHFV VAPTSFDAYF CSGDCKVGYL EQYPHTHLAA LTTSATPCCS 120
  121 PTKMSSLSLL YFDDNHNLVL SVIPNMSVEG CSCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.0
Match: 1bmpA
Description: BONE MORPHOGENETIC PROTEIN-7
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
pattern binding 0.90497366619649 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle