| Protein: | lgs-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1469 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgs-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..14] | [1465..178] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MLSTTMPRSP TQQQPQPNSD ASSTSASGSN PGAAIGNGDS AASRSSPKTL NSEPFSTLSP 60
61 DQIKLTPEEG TEKSGLSTSD KAATGGAPGS GNNLPEGQTM LRQNSTSTIN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [111-274] |
1 11 21 31 41 51
| | | | | |
1 SCLVASPQNS SEHSNSSNVS ATVGLTQMVD CDEQSKKNKC SVKDEEAEIS SNKAKGQAAG 60
61 GGCETGSTSS LTVKEEPTDV LGSLVNMKKE ERENHSPTMS PVGFGSIGNA QDNSATPVKI 120
121 ERISNDSTTE KKGSSLTMNN DEMSMEGCNQ LNPDFINESL NNPA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [275-429] |
1 11 21 31 41 51
| | | | | |
1 ISSILVSGVG PIPGIGVGAG TGNLLTANAN GISSGSSNCL DYMQQQNHIF VFSTQLANKG 60
61 AESVLSGQFQ TIIAYHCTQP ATKSFLEDFF MKNPLKINKL QRHNSVGMPW IGMGQVGLTP 120
121 PNPVAKITQQ QPHTKTVGLL KPQFNQHENS KRSTV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [430-1396] |
1 11 21 31 41 51
| | | | | |
1 SAPSNSFVDQ SDPMGNETEL MCWEGGSSNT SRSGQNSRNH VDSISTSSES QAIKILEAAG 60
61 VDLGQVTKGS DPGLTTENNI VSLQGVKVPD ENLTPQQRQH REEQLAKIKK MNQFLFPENE 120
121 NSVGANVSSQ ITKIPGDLMM GMSGGGGGSI INPTMRQLHM PGNAKSELLS ATSSGLSEDV 180
181 MHPGDVISDM GAVIGCNNNQ KTSVQCGSGV GVVTGTTAAG VNVNMHCSSS GAPNGNMMGS 240
241 STDMLASFGN TSCNVIGTAP DMSKEVLNQD SRTHSHQGGV AQMEWSKIQH QFFEERLKGG 300
301 KPRQVTGTVV PQQQTPSGSG GNSLNNQVRP LQGPPPPYHS IQRSASVPIA TQSPNPSSPN 360
361 NLSLPSPRTT AAVMGLPTNS PSMDGTGSLS GSVPQANTST VQAGTTTVLS ANKNCFQADT 420
421 PSPSNQNRSR NTGSSSVLTH NLSSNPSTPL SHLSPKEFES FGQSSAGDNM KSRRPSPQGQ 480
481 RSPVNSLIEA NKDVRFAASS PGFNPHPHMQ SNSNSALNAY KMGSTNIQME RQASAQGGSV 540
541 QFSRRSDNIP LNPNSGNRPP PNKMTQNFDP ISSLAQMSQQ LTSCVSSMGS PAGTGGMTMM 600
601 GGPGPSDINI EHGIISGLDG SGIDTINQNN CHSMNVVMNS MGPRMLNPKM CVAGGPNGPP 660
661 GFNPNSPNGG LRENSIGSGC GSANSSNFQG VVPPGARMMG RMPVNFGSNF NPNIQVKAST 720
721 PNTIQYMPVR AQNANNNNNN GANNVRMPPS LEFLQRYANP QMGAVGNGSP ICPPSASDGT 780
781 PGMPGLMAGP GAGGMLMNSS GEQHQNKITN NPGASNGINF FQNCNQMSIV DEEGGLPGHD 840
841 GSMNIGQPSM IRGMRPHAMR PNVMGARMPP VNRQIQFAQS SDGIDCVGDP SSFFTNASCN 900
901 SAGPHMFGSA QQANQPKTQH IKNIPSGMCQ NQSGLAVAQG QIQLHGQGHA QGQSLIGPTN 960
961 NNLMSTA
|
| Detection Method: | |
| Confidence: | 60.39794 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [1397-1469] |
1 11 21 31 41 51
| | | | | |
1 GSVSATNGVS GINFVGPSST DLKYAQQYHS FQQQLYATNT RSQQQQHMHQ QHQSNMITMP 60
61 PNLSPNPTFF VNK
|
| Detection Method: | |
| Confidence: | 0.979 |
| Match: | 1qb3A |
| Description: | cks1 |
Matching Structure (courtesy of the PDB): |
|
