Protein: | RpL6-PA |
Organism: | Drosophila melanogaster |
Length: | 243 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RpL6-PA.
Description | E-value | Query Range |
Subject Range |
|
329.0 | [0..21] | [243..52] |
|
323.0 | [0..4] | [243..27] |
|
322.0 | [0..4] | [243..27] |
|
321.0 | [0..21] | [243..53] |
|
320.0 | [0..17] | [243..40] |
Region A: Residues: [1-76] |
1 11 21 31 41 51 | | | | | | 1 MAPIEKAKKV AKSAKKGKKH PVNSYLKGGI LRYSKAQMYK RRALYRLKDK KSPVVEKAKV 60 61 PIKKSKASYP TKTFVK |
Detection Method: | |
Confidence: | 29.107905 |
Match: | PF03868.6 |
Description: | No description for PF03868.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [77-168] |
1 11 21 31 41 51 | | | | | | 1 KRPSKANFSE HKRNTRRNLT PGTVLILLAG RHQGKRVVLL KVLASGLLLV TGPFALNSCP 60 61 LRRVSQRYVI GTSSKVDLGA FKVPEHLNDA YF |
Detection Method: | |
Confidence: | 3.30103 |
Match: | 2joyA |
Description: | No description for 2joyA was found. |
Term | Confidence | Notes |
structural constituent of ribosome | 9.75663213016935 | bayes_pls_golite062009 |
structural molecule activity | 9.17485893013108 | bayes_pls_golite062009 |
translation elongation factor activity | 2.80478779442574 | bayes_pls_golite062009 |
transcription regulator activity | 2.61378960730317 | bayes_pls_golite062009 |
nucleic acid binding | 2.37728600449241 | bayes_pls_golite062009 |
DNA binding | 1.96482107461071 | bayes_pls_golite062009 |
binding | 1.64219262839972 | bayes_pls_golite062009 |
RNA binding | 1.4457902513736 | bayes_pls_golite062009 |
transcription factor activity | 1.22903201558409 | bayes_pls_golite062009 |
transcription elongation regulator activity | 0.44970112534522 | bayes_pls_golite062009 |
translation regulator activity | 0.20179424040045 | bayes_pls_golite062009 |
protein binding | 0.196068293929372 | bayes_pls_golite062009 |
translation factor activity, nucleic acid binding | 0.177099375659271 | bayes_pls_golite062009 |
Region A: Residues: [169-243] |
1 11 21 31 41 51 | | | | | | 1 RRLKAKKDKK TGEADIFAAK KERFVPNEQR KKDQKEVDAA LLKVIKAHPE GKFFAKYLQN 60 61 MFALHSSQYP HRMRF |
Detection Method: | |
Confidence: | 45.443697 |
Match: | PF01159.10 |
Description: | No description for PF01159.10 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.