| Protein: | gammaCop-PB |
| Organism: | Drosophila melanogaster |
| Length: | 883 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gammaCop-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
643.0 | [0..6] | [883..1] |
|
Region A: Residues: [1-595] |
1 11 21 31 41 51
| | | | | |
1 MNYFSLTSHK KHRGHPSAGP SNAYQNLEKT SVLQETRTFN ETPVNPRKCI HILTKILYLI 60
61 NQGEQLVARE ATDCFFAMTK LFQSKDVVLR RMVYLGIKEL SSIAEDVIIV TSSLTKDMTG 120
121 KEDLYRAAAI RALCSITDNT MLQAVERYMK QCIVDKNAAV SCAALVSSLR LANTAGDVVK 180
181 RWANEAQEAL NSDNIMVQYH ALGLLYHIRK SDRLAVSKLV NKLTRGSLKS PYAVCMLIRI 240
241 ACKLIEEEDI PSEELSDSPL FTFIESCLRH KSEMVIYEAA HAIVNLKNTN PRMLSPAFSI 300
301 LQLFCSSPKA TLRFAAVRTL NKVAMTHPAA VTTCNLDLEG LITDSNRSVA TLAITTLLKT 360
361 GAESSVERLM KQISTFVAEI SDEFKVVVVQ AICALCTKYP RKHTVLMNFL SGMLREEGGL 420
421 EYKTSIVDTI ITIIEENADA KESGLSHLCE FIEDCEHVSL AVRILHLLGK EGPFAATPSK 480
481 YIRFIYNRVI LESPIVRAAA VTAMAQFGAS CPALLSNILV LLGRCQMDPD DEVRDRATYY 540
541 LSILNSERPE LYKNYIIERE NCSLALLEKS LVEHLNGDVD TRFDISIVPK AAIVK
|
| Detection Method: |  |
| Confidence: | 93.522879 |
| Match: | 1w63B |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [596-883] |
1 11 21 31 41 51
| | | | | |
1 PVIANDVMLV TSSAPRPPKI TREEESAARL AQLPGIQVLG PIHRSTAPIQ LTESETEYTV 60
61 QCIKHIFGQH VVFQFDCLNT LSDQILENVR VELTLPEGFT TRAVIPCPKL PYNDLQTTFV 120
121 IVEFPPDAAN SIATFGATLR FVVKDCDPNT GEPESEEGYD DEYMLEDLEL TVADQIQKTR 180
181 KNNFQVSWDA ADSEEWLQAE DTFVLSAVTT LQDAVNTIVK ILGLGAANLS ENVPEGTHLH 240
241 TLLCSGTFRG GAEILVRAKL ALSEGVTLNL TVRSTDQDVA ELITAAIG
|
| Detection Method: | |
| Confidence: | 77.0 |
| Match: | 1pzdA |
| Description: | Structural Identification of a conserved appendage domain in the carboxyl-terminus of the COPI gamma-subunit. |
Matching Structure (courtesy of the PDB): |
|
