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View Structure Prediction Details

Protein: CG11334-PA, CG11...
Organism: Drosophila melanogaster
Length: 364 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11334-PA, CG11....

Description E-value Query
Range
Subject
Range
MTNA_GEOMG - Methylthioribose-1-phosphate isomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM...
423.0 [0..1] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQSIKYSR GSLEILDQLL LPGQSKYVVV RGVEDGWKVI NKMQVRGAPA IAIVGCLSLA  60
   61 VEINPEDFEN KKSLRQEIEG KLNYLVSARP TAVNMKIAAD ELITLANELY KDEAIDVTQM 120
  121 KHRFLDATEA MLKKDIADNR AIGANGAQAI LQGVAKAGKA PAGSTGSVRV LTHCNTGSLA 180
  181 TAGYGTALGV VRQLAELGKL EHVYCTETRP YNQGARLTAY ELVHEKFPAT LVLDSMVAAL 240
  241 LRAKNVAAVV VGADRVASNG DTANKIGTYQ IAVVAKHHDV PFYVAAPLTS IDLAIPGGDH 300
  301 IIIEERPDRE MTHVGEHRIA APGINCWNPA FDVTPASLIT GIITERGVFK PAELKEAITK 360
  361 LLES

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 118.0
Match: 1t9kA
Description: X-ray crystal structure of aIF-2B alpha subunit-related translation initiation factor [Thermotoga maritima]
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
translation initiation factor activity 10.1099993541596 bayes_pls_golite062009
translation regulator activity 5.74669335554405 bayes_pls_golite062009
nucleic acid binding 1.56128901279222 bayes_pls_golite062009
transferase activity, transferring sulfur-containing groups 1.40526340076289 bayes_pls_golite062009
catalytic activity 1.31732715713197 bayes_pls_golite062009
translation factor activity, nucleic acid binding 1.09424756417577 bayes_pls_golite062009
transcription regulator activity 0.987801998446038 bayes_pls_golite062009
binding 0.946249883212717 bayes_pls_golite062009
DNA binding 0.730721872216867 bayes_pls_golite062009
deaminase activity 0.518630450774121 bayes_pls_golite062009
S-methyl-5-thioribose-1-phosphate isomerase activity 0.511292518421556 bayes_pls_golite062009
transcription factor activity 0.195177143221873 bayes_pls_golite062009

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