| Protein: | CG11340-PA |
| Organism: | Drosophila melanogaster |
| Length: | 526 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11340-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
352.0 | [0..69] | [525..102] |
|
Region A: Residues: [1-421] |
1 11 21 31 41 51
| | | | | |
1 MDTLGIFVLI SYLGLSSAAG VHLGDLQQNL AANGSVVVSP LNTTDAFSVS INLSQSTVNN 60
61 CPSLKNAESM ALMELLTRLT APCRYDRMVP PVVHNKDGEE VPMDIYARFY IYVMKNLDSS 120
121 DLQFTVQGLL QLRYLDPRLA FSSYLPNRRQ PIMGESELKK MLWVPHIFLT NEQASTVLGT 180
181 SAKDELTSIY PNGTVLTSTR LQATLYCWMN FQKFPFDEQK CKTTLESWMY NTTLVQLHWE 240
241 TDNPVSFDKQ LQLTEYNLIG SLYNESIRVS NESYMSHGSL EGNYSIISFT VLLTREVGYY 300
301 VIDYFLPSIM IVTISWVSFW LQADQTPART TLGCTTLLSF ITLSLSQENN LMKVSYVTMS 360
361 EVWFLVCTIF IFGSLVEFAF VNTIWRRNND LQLKKRTTKY IVKSTFVPHL KKHRRHGYRR 420
421 T
|
| Detection Method: |  |
| Confidence: | 70.0 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [422-526] |
1 11 21 31 41 51
| | | | | |
1 DSTMSTMSTT SMDKTCGPNN TVITIETPII IGGSLSREDS AISLDEQDET STSESSDSSK 60
61 EKPAQTFATM TPKEVSLWID RKMRFVFPLS FIVFNALFWT LVYCL
|
| Detection Method: | |
| Confidence: | 33.154902 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
