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View Structure Prediction Details

Protein: zwilch-PA
Organism: Drosophila melanogaster
Length: 641 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for zwilch-PA.

Description E-value Query
Range
Subject
Range
gi|16183808 - gi|16183808|gb|AAL13732.1| LD21207p [Drosophila melanogaster]
942.0 [0..15] [641..1]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASANLANV YAELMRRCGE SYTITYGAPP TYLVSMVGAA EAGKKIVLVF KEDRNGAVAR  60
   61 LRTTPTRAAP KKEGSADLDL TGSPLKDDCL VDAIADLSID LQLDHSNPWK LEEEYQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGIPVDKARS IVCSEFLQLA EGLGSVWFLC DGSDLGQTQL LQYEFNPTHF SRGILSYQGV  60
   61 RPAYLVTSQA LVRHHG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [193-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTPDETLIEN SYQVNPHMRL RCSWTSSAAL PLLVNLNDCD VALNHTFRVG DCGPLTQDFM  60
   61 NQLRILVYIR EDIVSYHTDV KQGVSRDPTY RCGSGIDMDE LRESINQTMT DVSGLIG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [310-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RYSISNAEFD IEDVVQRAKV RQLTDLTDKL WELLKCCHSY KDLKIAFSML FQCAARCNIV  60
   61 NTPTNKNRLA KIITELANRR LAMPCLSGAE PLELLLEIGL EKLYKDYEFI YTESKMCSTN 120
  121 LLKDDSSGAS MDDGSPQNLP QLRKSLHNAV RGDP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [464-641]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPGAGMRKTL LHHHGAVNSR STKYAGSDDD AGFKNSHFDE HESTERISKL FQIHCTLEHL  60
   61 LMMHIHLNLA NVYNDVCSEL LKKPPKLVES IDDQLSDVMD IRLSAHYVRD HLDGKDPYSR 120
  121 HITMRSHNKF RELKTTFYFN SENICPPNLA QCFQCDDKEM VKERTYHSWI YHKIRSLK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle