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View Structure Prediction Details

Protein: Fer2LCH-PA, FBpp...
Organism: Drosophila melanogaster
Length: 227 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Fer2LCH-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|47125326 - gi|47125326|gb|AAH70494.1| FTH1 protein [Homo sapiens]
266.0 [0..34] [225..46]
gi|114637918 - gi|114637918|ref|XP_001140124.1| PREDICTED: similar to Ferritin heavy chain (Ferritin H subunit) (Pr...
265.0 [0..35] [225..105]
gi|83404987 - gi|83404987|gb|AAI11079.1| Fth1 protein [Rattus norvegicus]
259.0 [0..35] [225..48]
gi|109130320 - gi|109130320|ref|XP_001096278.1| PREDICTED: similar to ferritin, heavy polypeptide-like 17 [Macaca m...
245.0 [0..8] [225..78]
FRIH_TRIVU - Ferritin heavy chain OS=Trichosurus vulpecula GN=FTH1 PE=2 SV=3
244.0 [0..38] [225..1]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFVALALF ACLGSLALAK DDEYCQNTVI TACSTSAFSA NSICNARFAG IDHIEPEIQS  60
   61 YINANLAKSY DYLLLATHFN SYQKNRPGFQ KLYQGLSDRS FEDSIALIKQ VTRRGGIVDF 120
  121 NTRHESSGSV STKRGTLEVD ELHSLALALD TEKQLATGAT HVHSRATHAT DAERDPELAH 180
  181 YFEENFLGKQ AESVRKLSGY ANDLAKLMKV PDPSLSVYLF DEYLQKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.30103
Match: 1z6oA
Description: Crystal Structure of Trichoplusia ni secreted ferritin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ferric iron binding 3.18009142336247 bayes_pls_golite062009
iron ion binding 3.10225782829614 bayes_pls_golite062009
binding 1.75965809318506 bayes_pls_golite062009
transition metal ion binding 1.70242943635222 bayes_pls_golite062009
cation binding 1.66873432300081 bayes_pls_golite062009
metal ion binding 1.66873432300081 bayes_pls_golite062009
ion binding 1.66140448750278 bayes_pls_golite062009
ribonucleoside-diphosphate reductase activity 0.366005079572569 bayes_pls_golite062009
oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 0.289628933165632 bayes_pls_golite062009
protein binding 0.20531413038279 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle