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View Structure Prediction Details

Protein: yata-PA, FBpp0305956
Organism: Drosophila melanogaster
Length: 873 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for yata-PA, FBpp0305956.

Description E-value Query
Range
Subject
Range
gi|125773829, gi... - gi|54637908|gb|EAL27310.1| GA15165-PA [Drosophila pseudoobscura], gi|125773829|ref|XP_001358173.1| G...
459.0 [0..1] [873..1]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSFFSRDSS KDFPYDIGEP VGGFDQYSIW TLHKAKRKTT LEEVSVFVYD IRSGSDTKCE  60
   61 LAKAALKRLK TLRHPSILQY LDSLETDKML YVATEAVDPL GTYFSKLGSD NVQKGLYLAW 120
  121 GIFQITRALS FLNNDGNLRH NNVSAWSVFV NASGEWKLGS LEYVSAADGN PMPPAKIPVT 180
  181 LEVYDSPEKN DPSKLKAATK CSVDMWGLGC LVWEAFNGVL KQRSNLKDIE HIPKSLQSLY 240
  241 CELVGASPSN RPNPADIITR CRKPGGFFKN DLVDTLLFLE EIQIKDKAEK NRFFSGLTTH 300
  301 LDNFPDNVCR HKILPQLITA YEYGD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.09691
Match: 2qnjA
Description: No description for 2qnjA was found.

Predicted Domain #2
Region A:
Residues: [326-590]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGSAVLAPMF KLGKLLDEVE YQKRIVPCVV KLFASTDRVT RSRLLQQLDL FIAHLQPQVV  60
   61 NDQIFPQVAH GFLDTNATIR EQTVKSIIHL APKLNYNNLN VEVLRHFARL QARDDQGGIR 120
  121 TNTTVCLGKI APHLHPQVRQ RVLVSAFIRA MRDPFPPARV AGVLALAATQ QYFLLSEVAN 180
  181 RVLPSLCSLT VDPEKTVRDP AFKTIRGFLG KLEKVSEDPS LRETMEADVH TATPSIGNAA 240
  241 ATWAGWAVTA VTAKFYRSQS DSSRP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.15
Match: 2ie3A
Description: No description for 2ie3A was found.

Predicted Domain #3
Region A:
Residues: [591-873]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPPLTGRNLS KPASLEQPSS SSLSTTTSSV TSMTSLEHES NDTSASASDY GNNDWDNENW  60
   61 GEMDTSQDPS SPLAASSNNG ALMAANALSE VRDGWDNEEW GSLEEDPCEE EEQAEQEQQQ 120
  121 QQLARQSISS TSSSQPNQRP LLPHQQQYPH QQQLQQHELN DLIEPLAKLN SHVTSPSKQS 180
  181 MLRPKELPNL SSSNTSPTSA TANCNNISPP SSHLNNSTHN ANWNSDSWAD GEFEPLDESG 240
  241 FGNAKLDEAR RKREEKKLQR QRELEARRAQ RASGPMKLGA KKL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle