| Protein: | Hrb98DE-PC, Hrb9... |
| Organism: | Drosophila melanogaster |
| Length: | 365 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Hrb98DE-PC, Hrb9....
| Description | E-value | Query Range |
Subject Range |
|
|
227.0 | [0..19] | [346..41] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MVNSNQNQNG NSNGHDDDFP QDSITEPEHM RKLFIGGLDY RTTDENLKAH FEKWGNIVDV 60
61 VVMKDPRTKR SRGFGFITYS HSSMIDEAQK SRPHKIDGRV VEPKRAVPRQ DIDSPNAGAT 120
121 VKKLFVGALK DDHDEQSIRD YFQHFGNIVD INIVIDKETG KKRGFAFVEF DDYDPVDKVV 180
181 LQKQHQLNGK MVDVKKALPK QNDQQGGGGG RGGPGGRA
|
| Detection Method: |  |
| Confidence: | 54.69897 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [219-365] |
1 11 21 31 41 51
| | | | | |
1 GGNRGNMGGG NYGNQNGGGN WNNGGNNWGN NRGGNDNWGN NSFGGGGGGG GGYGGGNNSW 60
61 GNNNPWDNGN GGGNFGGGGN NWNNGGNDFG GYQQNYGGGP QRGGGNFNNN RMQPYQGGGG 120
121 FKAGGGNQGN YGGNNQGFNN GGNNRRY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
