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View Structure Prediction Details

Protein: CG5508-PB
Organism: Drosophila melanogaster
Length: 757 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5508-PB.

Description E-value Query
Range
Subject
Range
CG5508-PC - This gene is referred to in FlyBase by the symbol Dmel\CG5508 (CG5508, FBgn0027579). It is a protein...
526.0 [0..1] [757..30]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELTPHSGQ KPFKKLFDWG VLFPYVAQVV RSEKFEYRQV TEIVHNDAVL KHAIKQAAEQ  60
   61 TLREQRYAKN GHRLLTRSAS GDQEAQEEED EKRGISYQAI LRKQEQRAIS ILKDMGSTLN 120
  121 NGLLAFTSW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [130-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ILYKLLPCFL SGVVTNTKQI EMLKTATERS PGTPLIFVPL HRSHLDYIMV TWILTNNDIR  60
   61 SPLVAAGNNL QIPVFGGLLR GLGAFFIKRK IDPVEGKKDV LYRAALHLYL THALKQGHNV 120
  121 EFFIEGGRTR TGKPCMPKGG ILSVIVNAFM DGSIPDALLV PVSVNYERLV DGNFVREQKG 180
  181 EKKIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.154902
Match: 1iuqA
Description: The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [315-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESFGKAISGI WKALKSNYGL MRIDFNEPYS IRELVNSYNK IAREDGNIAK VYKPSARVLQ  60
   61 HNQSTSSLYG TDVVCEEHRN LIESISRQVV FDCAAATSVM STNALAFLLL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [425-611]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRFRNGAEEQ ILSEALDDLR NSLSGCKDIG FSGESSQIVA YACDLLGSGL VTRSRDENGR  60
   61 LVIKAVNSVE SFIELAYYSN MLTPHFALSS ILLTTFHSLL PETENKKEAA VSRKKLIDTA 120
  121 LENCQIYRYE FILNKPTQVL ENLLYQQLDD LLISGCVLTE KLHDDLPNGA EGRRLANVLA 180
  181 ECLDEDG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [612-757]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YEDVRDGEAD EPKLLFASET PSQQRYICEV LAPFAWTYVT VAQSLQILHK NSMLESEFIS  60
   61 FVINDLSSKV KRGSCIYAES ISTDSVRNCL KLLEKWSVIE VCNQQGMRLI SLNTLYEMSR 120
  121 ESLNSIVKKI DAIVPKFNSG YFSVTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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