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View Structure Prediction Details

Protein: ALiX-PA
Organism: Drosophila melanogaster
Length: 836 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALiX-PA.

Description E-value Query
Range
Subject
Range
gi|91076738 - gi|91076738|ref|XP_973055.1| PREDICTED: similar to CG12876-PA [Tribolium castaneum]
343.0 [0..1] [836..1]

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Predicted Domain #1
Region A:
Residues: [1-711]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFLGVPLK KPSEVDVIKP LNNLIQSTYN GASEEEKGKY GEAVNEFSKQ RNTAIWKFFE  60
   61 KYEASLEIVY AYYDQICALE TKISVSELQI PFKWKDAFDK GSIFGGKISL THTSLLYEKV 120
  121 CVLFNIAALQ SNIAANQSLD SDDGLKLTIK LLQQSAGIFQ YLKGATPAAV PSEPTPDLSQ 180
  181 DTLTVLQALM VAQAQEVFIL KAIKDNLKDQ IIAKLCCQAE ESYADVLRAM QKESVRSLWE 240
  241 KEWIPTIAGK QAGFHALTQL YQSLVCRAAK KIGEEIARLR NAIDLFKAAQ TRSGNETYLD 300
  301 EYFSRAKRNL TESTKDNEFI YNEIIPELST LTSPGKAQLA KPLPIAVPLA ENFKDIFSSL 360
  361 VPVELHRALT ASDMRRNEIV NVEIMKLREA TQTLNAVLAS LNLPAAVETA DGNSGLPPSL 420
  421 KEKANEVRQK GGIENVQTML KDLPELLNRN REILDETERL LDEERDSDNQ LRAQFKDRWT 480
  481 RISSDKLTEM FRTNAKKYRE VITNAIEADK VVRQKFEANQ KGIQLLSLPP DQIQQSLPSA 540
  541 SGSVDPNCSS VQRLKKLMDD VETIKAEREA IESELKGATF NMKDEFLIAL QKDGAIDEPA 600
  601 LSLARIGQVL NPLQQQVRES VERQQSLVSE IQSAHGAFVS ETGSCGSSRD TLYQELATAF 660
  661 DSYIELSGNL QEGTKFYNDL TQLLVVFQNK ISDFVFARKT EKEELLKDLT T

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.30103
Match: 2oevA
Description: No description for 2oevA was found.

Predicted Domain #2
Region A:
Residues: [712-836]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESSRQACPAT PALPSHYAST SGSGSDIPPG SAPSVPPAAS TANIPYPAQV QGMPIPYGAQ  60
   61 PGVPYPAYVP APMPQSFNPY ATLPYPGNYQ YQGFPQGPPP GHYGTYPGSY ANQQGGYPNQ 120
  121 KPPGW

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.03
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle