YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Mdh-PA
Organism: Drosophila melanogaster
Length: 617 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Mdh-PA.

Description E-value Query
Range
Subject
Range
gi|6634090 - gi|6634090|emb|CAB64263.1| malate dehydrogenase (NADP-dependent oxaloacetate decarboxylating), malic...
800.0 [0..1] [593..1]

Back

Predicted Domain #1
Region A:
Residues: [1-617]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSRPSLCGT VGKLCRCGTS ATGKTAVAAA TVPTARHYHE VVGDIICPSQ VRGIDHIRDP  60
   61 RLNKGLAFTL EERQTLGIHG LQPARFKTQE EQLQLCKIAV NRYTEPLNKY LYLSDLYDRN 120
  121 ERLFFRFLSE NIEDLMPIVY TPTVGLACQR FGLIYRRPHG LFITYNDRGH IFDVMKNWPE 180
  181 PNVRAICVTD GERILGLGDL GACGMGIPVG KLALYTALAG IKPHQCLPIV VDVGTNNIDL 240
  241 LEDPLYVGLR QKRVVGREYD EFIDEFMEAV VQRYGQNTLI QFEDFGNHNA FRFLDKYRNT 300
  301 YCTFNDDIQG TASVAVAGLY ASKRITGKSF KDYTFLFAGA GEAAIGIADL TVKAMVQDGV 360
  361 PIEEAYNRIY MVDIDGLLTK SRKVGNLDGH KIHYAKDINP MSDLAEIVST IKPSVLIGAS 420
  421 AAAGIFTPEI LRTMADNNER PVVFALSNPT SKAECTAEDA YKHTDARVIF SSGSPFPPVQ 480
  481 IGDKTFYPGQ GNNAYIFPGV GLGVICTGTH HIPDEMFLIA AQELANFVEP SDIERGSLYP 540
  541 PLSSIRNVSM NIAVGVTKCA YDRGLASTYP EPQDKRKWLE NQLYNFNYES SMPASWVWPR 600
  601 MPYIKTREES PLIAAIK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2aw5A
Description: Crystal structure of a human malic enzyme
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle