| Protein: | Rb97D-PI, Rb97D-... |
| Organism: | Drosophila melanogaster |
| Length: | 471 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rb97D-PI, Rb97D-....
| Description | E-value | Query Range |
Subject Range |
|
|
244.0 | [0..7] | [379..163] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MVKDEPLSDE SADVIVLADR EEDDICELEH LRKLFIGGLA PYTTEENLKL FYGQWGKVVD 60
61 VVVMRDAATK RSRGFGFITY TKSLMVDRAQ ENRPHIIDGK TVEAKRALPR PERESRETNI 120
121 SVKKLFVGGL KDNHDEECLR EYFLQFGNVV SVKLLTDKTT GKRRGFAFVE FDDYDAVDKA 180
181 ILKKQHAIKY VHVDVKKSIY NLDKKEKQQ
|
| Detection Method: |  |
| Confidence: | 61.69897 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.86761524461453 | bayes_pls_golite062009 |
| mRNA binding | 0.82173997395155 | bayes_pls_golite062009 |
| nucleic acid binding | 0.727288287394927 | bayes_pls_golite062009 |
| protein binding | 0.426607329742248 | bayes_pls_golite062009 |
| RNA binding | 0.299180957062386 | bayes_pls_golite062009 |
|
Region A: Residues: [210-327] |
1 11 21 31 41 51
| | | | | |
1 PGGLANAIKP SLNQQQQQQG GGQQPPNGNM QAPSFRPPVP PQQAMGPYQQ QPPPAPMSAP 60
61 PPNFNYWGPP PPAMPPYYQQ PPPQQMNGWG PYPPPQQNGW NAPPPPPPGA QQWHANQW
|
| Detection Method: | |
| Confidence: | 1.17 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [328-471] |
1 11 21 31 41 51
| | | | | |
1 GCPPPVQQVP PVGAVPPPMG HNGPPPTAPG NWNMPPPVPG AAPPSHQQQS SQQPTPQPNF 60
61 GTGYQQNYGG GPSKHNNMNA NRMNPYSAGP PNSYHTPQPP AYTGYNAGPL PPNGSVPPPT 120
121 GAKAVGVSNG SVATGGSANS KYRR
|
| Detection Method: | |
| Confidence: | 6.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
