| Protein: | HLHm5-PA |
| Organism: | Drosophila melanogaster |
| Length: | 178 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HLHm5-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
134.0 | [0..2] | [167..17] |
|
|
133.0 | [0..1] | [178..1] |
|
|
133.0 | [0..2] | [173..81] |
|
|
130.0 | [0..2] | [174..17] |
|
|
130.0 | [0..1] | [178..1] |
|
|
128.0 | [0..2] | [168..17] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MAPQSNNSTT FVSKTQHYLK VKKPLLERQR RARMNKCLDT LKTLVAEFQG DDAILRMDKA 60
61 EMLEAALVFM RKQVVKQQAP V
|
| Detection Method: |  |
| Confidence: | 13.522879 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 5.05768805749761 | bayes_pls_golite062009 |
|
Region A: Residues: [82-178] |
1 11 21 31 41 51
| | | | | |
1 SPLPMDSFKN GYMNAVSEIS RVMACTPAMS VDVGKTVMTH LGVEFQRMLQ ADQVQTSVTT 60
61 STPRPLSPAS SGYHSDNEDS QSAASPKPVE ETMWRPW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.684 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.623 | a.25.1 | Ferritin-like |
| View | Download | 0.484 | a.25.1 | Ferritin-like |
| View | Download | 0.478 | a.24.1 | Apolipoprotein |
| View | Download | 0.459 | a.74.1 | Cyclin-like |
