| Protein: | CG5948-PA |
| Organism: | Drosophila melanogaster |
| Length: | 270 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5948-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
236.0 | [0..1] | [246..1] |
|
|
191.0 | [0..94] | [258..3] |
|
|
187.0 | [0..94] | [248..4] |
|
|
187.0 | [0..19] | [258..22] |
|
|
175.0 | [0..94] | [246..4] |
|
|
174.0 | [0..94] | [246..4] |
|
|
173.0 | [0..94] | [246..4] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MLIKLILALV IGYGGIFAPG SAQNLLDRLR PVNMTRFDDG IKVVSGTKVK RYERLTVPLG 60
61 GPVGIPGAAG LLGPLLPPQP SYLGYTYQLV PQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.643 | d.48.1 | RecA protein, C-terminal domain |
| View | Download | 0.492 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.349 | g.37.1 | C2H2 and C2HC zinc fingers |
| View | Download | 0.307 | d.9.2 | Description not found. |
| View | Download | 0.287 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
|
Region A: Residues: [93-270] |
1 11 21 31 41 51
| | | | | |
1 WQAGAKLMGD GEGAGVAGMI SFVQLPYNSD IRVTINVTGL PPGKHALHIH TFGDLSDGCK 60
61 STGGQFPNNF LGNVDTKDDG SISAVFQSIY LQLFGINGIV GRSIVIHSKA IDLNTALNAE 120
121 VFSSSLQAMP NPLAYQNEEN SLGPAIACGV ISIMSTAASS SGMATAAPAP PAMENPEI
|
| Detection Method: | |
| Confidence: | 42.69897 |
| Match: | 1hl4A |
| Description: | Cu,Zn superoxide dismutase, SOD |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein phosphatase 2B binding | 13.5719110466797 | bayes_pls_golite062009 |
| superoxide dismutase activity | 12.1093323949609 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on superoxide radicals as acceptor | 12.1093323949609 | bayes_pls_golite062009 |
| chaperone binding | 5.11696266714142 | bayes_pls_golite062009 |
| superoxide dismutase copper chaperone activity | 4.90125496493753 | bayes_pls_golite062009 |
| copper ion binding | 4.51765925795625 | bayes_pls_golite062009 |
| protein phosphatase binding | 3.26481550276071 | bayes_pls_golite062009 |
| phosphatase binding | 3.1414149853516 | bayes_pls_golite062009 |
| transition metal ion binding | 2.451533032488 | bayes_pls_golite062009 |
| binding | 2.28211284921339 | bayes_pls_golite062009 |
| enzyme binding | 1.82618630359051 | bayes_pls_golite062009 |
| metal ion binding | 1.79413011653575 | bayes_pls_golite062009 |
| cation binding | 1.79413011653575 | bayes_pls_golite062009 |
| ion binding | 1.78699219376941 | bayes_pls_golite062009 |
| catalytic activity | 1.09233965765942 | bayes_pls_golite062009 |
| protein binding | 0.916153188966515 | bayes_pls_golite062009 |
| copper ion transmembrane transporter activity | 0.658369569046781 | bayes_pls_golite062009 |
| metallochaperone activity | 0.515959593535099 | bayes_pls_golite062009 |
| copper chaperone activity | 0.412497194733789 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.32642292951469 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.262312399748454 | bayes_pls_golite062009 |
| zinc ion binding | 0.25600715352161 | bayes_pls_golite062009 |
| antioxidant activity | 0.240491838042064 | bayes_pls_golite062009 |
