| Protein: | FBpp0293748, msi... |
| Organism: | Drosophila melanogaster |
| Length: | 634 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0293748, msi....
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..51] | [590..2] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MLFENPAVAA KLPFPYNVPP PLQAAAAAAA AVPNLRFQTP IKAFACLTAA TRSVSEMNAT 60
61 SLYAGNPMEN AAAAAAAAAA GLIDPHHNRD LHQALVASIA NNSVAAIGGG LTTAAVLKSA 120
121 AQQSQQAVQQ NQNAVVVTPG LEQ
|
| Detection Method: |  |
| Confidence: | 31.522879 |
| Match: | 1fnxH |
| Description: | Hu antigen C (Huc) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [144-277] |
1 11 21 31 41 51
| | | | | |
1 PKQEPAQQAA LALLKENVNA SAGAGQNNGQ AAMGGSNKSG SSGRSTPSLS GGSGSDPAPG 60
61 KLFVGGLSWQ TSSDKLKEYF NMFGTVTDVL IMKDPVTQRS RGFGFITFQE PCTVEKVLKV 120
121 PIHTLDGKKI DPKH
|
| Detection Method: | |
| Confidence: | 5.26 |
| Match: | 2cjkA |
| Description: | No description for 2cjkA was found. |
|
Region A: Residues: [278-424] |
1 11 21 31 41 51
| | | | | |
1 ATPKNRPRQA NKTKKIFVGG VSQDTSAEEV KAYFSQFGPV EETVMLMDQQ TKRHRGFGFV 60
61 TFENEDVVDR VCEIHFHTIK NKKVECKKAQ PKEAVTPAAQ LLQKRIMLGT LGVQLPTAPG 120
121 QLIGARGAGV ATMNPLAMLQ NPTQLLQ
|
| Detection Method: | |
| Confidence: | 47.0 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [425-634] |
1 11 21 31 41 51
| | | | | |
1 SPAAAAAAQQ AALISQNPFQ VQNAAAAASI ANQAGFGKLL TTYPQTALHS VRYAPYSIPA 60
61 SAATANAALM QAHQAQSVAA AAHHHQQQQQ QQHHHQQQTH NAHVAAAQQQ QQSHHNAVSN 120
121 PASQAHSAAA AAALAANAAN GAGAAGAHSL AAAAQQAGLM AGNPLNAAAA AAAAAANPAA 180
181 AYSNYALANV DMSSFQGVDW STMYGMGMYV
|
| Detection Method: | |
| Confidence: | 5.39794 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
