| Protein: | CG5720-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1004 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5720-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
356.0 | [0..24] | [969..688] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MECNLGSEIG QKMRSAVKAK LLELGTGGSA GFIDDELPDY VMVMVANKRT KQQMNAELNL 60
61 FLGDQTDLFV TWLHEVLQKL QEVTLPTSSA
|
| Detection Method: |  |
| Confidence: | 1.14 |
| Match: | 1miuA |
| Description: | BRCA2 helical domain; BRCA2 tower domain; OB-fold domains of BRCA2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [91-602] |
1 11 21 31 41 51
| | | | | |
1 SSKKRKSRGQ EKDKKGSKKD KRPHRKSGDE LSEPQPSSSD AMPIVSSITD VFAEELLEKA 60
61 KKTMDIDLSA KDEILHKKKN RKSIEDEDAS ANRALDVPAV SEIISTTIGV NRQKDLAELA 120
121 EIQKKIHAAK KHLRQIGEIG DESDEYDEDL LNLSAREESV DQEPEEDPPK LEAPPRKAKS 180
181 PIIFNRREKT PEKRPEAEPE IDSRQEEAEE KSPKKDSSAD KAKEDRSERR SVHDRLGSKA 240
241 QTPADRSQRN QKELYVPTHR RRSEPEATKE RSQRERTRER RSSRDTSRDT NRNQRQRRSP 300
301 SPEAPSTKQR IVSQVIVAVN KPPEPSDDED MAEKPVNSVI KVKPRPNVSP RRQACKNLLL 360
361 RAVADAQRST ILAKTSTQKE DEDVGKIISS LGKRKSEDKN DQIRKRNRER KRRKRSAQGN 420
421 ELFRRTTREL VVNVTQRDGK RERRSNERRA EIKVVEEEYT PSLMTEGVET YVPQLLTNVD 480
481 ELDLHISSHD EPSPNSGALK TQFVVTLNGD KA
|
| Detection Method: | |
| Confidence: | 0.988 |
| Match: | 1yvlA |
| Description: | Structure of Unphosphorylated STAT1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [603-815] |
1 11 21 31 41 51
| | | | | |
1 LGGKNVKGGA SRKRPSNSRK RSTSPVSTPQ VSSSNIEPTS TTVDKRRRSN RDRSFSPSPR 60
61 QSSGSPSLPT TRSINRNEVR RQPQEIKKII IKNDTDEDDE MHGSPKKRSP NKRQPAAANG 120
121 HKDNKDKGKI EEGSTTPPLP AKPKARAEKK ASSKEKSVRS NSAETSSAAK SVSASTSVST 180
181 TTKAKHTPIR FTLKSEDEPS ASKKRRSGSP DRD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [816-1004] |
1 11 21 31 41 51
| | | | | |
1 VAAPERRRVS IRNPEDRKYD NLPALSAVSV DSTVLKVNKP KERCKYHPNC TKQFCEYYHP 60
61 TAPCKSFPNC KFADKCMYSH PKCKFDMACM SIDCNYAHGG QRDLSHVQLA APPLSSHVIP 120
121 VQNYKSISAP VTSTTATTMC KYYPNCSKLG CTFYHPKPCR FGKNCVNKLE CIFYHPEMQS 180
181 KFKWVASLG
|
| Detection Method: | |
| Confidence: | 1.48 |
| Match: | 1nbsA |
| Description: | Crystal structure of the specificity domain of Ribonuclease P RNA |
Matching Structure (courtesy of the PDB): |
|
