| Protein: | Syx1A-PA |
| Organism: | Drosophila melanogaster |
| Length: | 291 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Syx1A-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
200.0 | [0..40] | [287..131] |
|
|
185.0 | [0..17] | [266..21] |
|
|
183.0 | [0..3] | [290..12] |
|
|
181.0 | [0..1] | [291..1] |
|
|
179.0 | [0..3] | [290..2] |
|
|
178.0 | [0..1] | [291..1] |
|
|
175.0 | [0..3] | [290..2] |
|
|
175.0 | [0..3] | [290..1] |
|
Region A: Residues: [1-291] |
1 11 21 31 41 51
| | | | | |
1 MTKDRLAALH AAQSDDEEET EVAVNVDGHD SYMDDFFAQV EEIRGMIDKV QDNVEEVKKK 60
61 HSAILSAPQT DEKTKQELED LMADIKKNAN RVRGKLKGIE QNIEQEEQQN KSSADLRIRK 120
121 TQHSTLSRKF VEVMTEYNRT QTDYRERCKG RIQRQLEITG RPTNDDELEK MLEEGNSSVF 180
181 TQGIIMETQQ AKQTLADIEA RHQDIMKLET SIKELHDMFM DMAMLVESQG EMIDRIEYHV 240
241 EHAMDYVQTA TQDTKKALKY QSKARRKKIM ILICLTVLGI LAASYVSSYF M
|
| Detection Method: |  |
| Confidence: | 33.09691 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphatidic acid binding | 8.51970136264329 | bayes_pls_golite062009 |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| protein transporter activity | 2.96543140800925 | bayes_pls_golite062009 |
| binding | 2.76125772097759 | bayes_pls_golite062009 |
| protein binding | 2.66728689880621 | bayes_pls_golite062009 |
| SNARE binding | 1.85060343142976 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.84645272212664 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| myosin head/neck binding | 1.62782051964352 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| calcium channel regulator activity | 1.03966990325407 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| gated channel activity | 0.621670335227137 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| extracellular-glutamate-gated ion channel activity | 0.394485000881621 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| myosin heavy chain binding | 0.29109171472743 | bayes_pls_golite062009 |
| myosin binding | 0.17223293441022 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
