| Protein: | spas-PA, spas-PB |
| Organism: | Drosophila melanogaster |
| Length: | 758 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spas-PA, spas-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
471.0 | [0..1] | [758..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MVRTKNQSSS SSASSSSTKS PIKSSSGAGS SGGGLGGRQS THRSSSASNV AAVVAGGSSA 60
61 AGGGSSSNRR SPGSSPDGDD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [81-176] |
1 11 21 31 41 51
| | | | | |
1 DTTTTDDLTP TTCSPRSGHH HSYGGYSSSV HKQNLYVVSF PIIFLFNVLR SLIYQLFCIF 60
61 RYLYGASTKV IYRPHRRDCN IEIVVQNSSK EQQQSL
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 1mbuA |
| Description: | N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [177-758] |
1 11 21 31 41 51
| | | | | |
1 NHPSELNREG DGQEQQLSNQ PQRFRPIQPL EMAANRPGGG YSPGPGDPLL AKQKHHHRRA 60
61 FEYISKALKI DEENEGHKEL AIELYRKGIK ELEDGIAVDC WSGRGDVWDR AQRLHDKMQT 120
121 NLSMARDRLH FLALREQDLQ MQRLSLKEKQ KEEAQSKPQK TREPMLAGMT NEPMKLRVRS 180
181 SGYGPKATTS AQPTASGRKL TIGSKRPVNL AVANKSQTLP RNLGSKTSVG AVQRQPAKTA 240
241 ATPPAVRRQF SSGRNTPPQR SRTPINNNGP SGSGASTPVV SVKGVEQKLV QLILDEIVEG 300
301 GAKVEWTDIA GQDVAKQALQ EMVILPSVRP ELFTGLRAPA KGLLLFGPPG NGKTLLARAV 360
361 ATECSATFLN ISAASLTSKY VGDGEKLVRA LFAVARHMQP SIIFIDEVDS LLSERSSSEH 420
421 EASRRLKTEF LVEFDGLPGN PDGDRIVVLA ATNRPQELDE AALRRFTKRV YVSLPDEQTR 480
481 ELLLNRLLQK QGSPLDTEAL RRLAKITDGY SGSDLTALAK DAALEPIREL NVEQVKCLDI 540
541 SAMRAITEQD FHSSLKRIRR SVAPQSLNSY EKWSQDYGDI TI
|
| Detection Method: | |
| Confidence: | 107.0 |
| Match: | 1oz4A |
| Description: | VCP/p97 |
Matching Structure (courtesy of the PDB): |
|
