YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG5933-PA
Organism: Drosophila melanogaster
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5933-PA.

Description E-value Query
Range
Subject
Range
gi|125775089, gi... - gi|54638537|gb|EAL27939.1| GA19241 [Drosophila pseudoobscura pseudoobscura], gi|125775089|ref|XP_001...
gi|125775089|ref... - GA19241-PA [Drosophila pseudoobscura], GA19241 [Drosophila pseudoobscura pseudoobscura]
417.0 [0..1] [607..1]

Back

Predicted Domain #1
Region A:
Residues: [1-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAWDIKSL KTKRNTLREK LEKRKKERIE ILSDIQEDLT NPKKELVEAD LEVQKEVLQA  60
   61 LSSCSLALPI VSTQVVEKIA GSSLEMVNFI LGKLANQGAI VIRNVTIGTE AGCEIISVQP 120
  121 KELKEILEDT NDTCQQKEEE AKRKLEVDDV DQPQEKTIKL ESTVARKEST SLDAPDDIMM 180
  181 LLSMPSTREK QSKQVGEEIL ELLTKPTAKE RSVAEKFKSH GGAQVMEFCS HGTKVECLKA 240
  241 QQATAEMAAK KKQERRDEKE LRPDVDAGEN VTGKVPKTES AAEDGEIIAE VINNCEAESQ 300
  301 ESTDGSDTCS SETTDKCTKL HFKKIIQAHT DESLGDCSFL NTCFHMAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [349-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CKYVHYEVDT LPHINTNKPT DVKTKLSLKR SVDSSCTLYP PQWIQCDLRF LDMTVLGKFA  60
   61 VVMADPPWDI HMELPYGTMS DDEMRALGVP ALQDDGLIFL WVTGRAMELG RDCLKLWGYE 120
  121 RVDELIWVKT NQLQRIIRTG RTGHWLNHGK EHCLVGMKGN PTNLNRGLDC DVIVAEVRAT 180
  181 SHKPDEIYGI IERLSPGTRK IELFGRPHNI QPNWITLGNQ LDGIRLVDPE LITQFQKRYP 240
  241 DGNCMSPASA NAASINGIQK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.21
Match: 1eg2A
Description: m.RsrI N6 adenosine-specific DNA methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
methyltransferase activity 3.68431317301075 bayes_pls_golite062009
N-methyltransferase activity 3.64494850793256 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 3.60853685152199 bayes_pls_golite062009
protein methyltransferase activity 3.51986359093355 bayes_pls_golite062009
DNA-methyltransferase activity 3.27333514131005 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 2.91374296950366 bayes_pls_golite062009
histone methyltransferase activity 2.666651371662 bayes_pls_golite062009
RNA methyltransferase activity 2.63941856307703 bayes_pls_golite062009
protein-arginine N-methyltransferase activity 1.99340565364513 bayes_pls_golite062009
arginine N-methyltransferase activity 1.99340565364513 bayes_pls_golite062009
transferase activity 1.97261773840408 bayes_pls_golite062009
rRNA methyltransferase activity 1.85380504590369 bayes_pls_golite062009
binding 1.65046086869658 bayes_pls_golite062009
histone-arginine N-methyltransferase activity 1.64765900536818 bayes_pls_golite062009
transcription regulator activity 1.59599828300594 bayes_pls_golite062009
site-specific DNA-methyltransferase (adenine-specific) activity 1.5743030926483 bayes_pls_golite062009
DNA binding 1.48691268044769 bayes_pls_golite062009
tRNA methyltransferase activity 1.38914410921124 bayes_pls_golite062009
nucleic acid binding 1.36595590938226 bayes_pls_golite062009
protein-arginine omega-N monomethyltransferase activity 1.27753381141602 bayes_pls_golite062009
DNA (cytosine-5-)-methyltransferase activity 1.23915163423518 bayes_pls_golite062009
catalytic activity 1.16970557486814 bayes_pls_golite062009
protein-arginine omega-N symmetric methyltransferase activity 0.862671287243863 bayes_pls_golite062009
histone methyltransferase activity (H4-R3 specific) 0.735680462496249 bayes_pls_golite062009
protein-arginine omega-N asymmetric methyltransferase activity 0.51222176401398 bayes_pls_golite062009
tRNA (cytosine-5-)-methyltransferase activity 0.325961687103877 bayes_pls_golite062009
tRNA (cytosine)-methyltransferase activity 0.325961687103877 bayes_pls_golite062009
rRNA (uridine) methyltransferase activity 0.283627597838594 bayes_pls_golite062009
histone binding 0.230289474831554 bayes_pls_golite062009
rRNA (adenine) methyltransferase activity 0.113328595762489 bayes_pls_golite062009
rRNA (adenine-N6,N6-)-dimethyltransferase activity 0.0390774859535424 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle