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View Structure Prediction Details

Protein: eIF-3p66-PB
Organism: Drosophila melanogaster
Length: 560 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for eIF-3p66-PB.

Description E-value Query
Range
Subject
Range
gi|7141239 - gi|7141239|gb|AAF37264.1|AF220363_1 eukaryotic translation initiation factor 3 p66 subunit [Drosophi...
921.0 [0..1] [560..1]

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Predicted Domain #1
Region A:
Residues: [1-64]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETINTAAQ FPSFEKPTVQ FNEKGWGPCE LPDTFKDVPY QPFSKNDRLG KICDWTNTSN  60
   61 NDKK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [65-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YQNKYASSFG TGIQYSYYHE EDETTFHLVD TARVQKPPHQ RGRFRNMRNS RSGRGRNARG  60
   61 GLNTHGMTTL SGKNVKARDP RHGRGMGKKF GHRGPPPKMR ESSVAVRADW ASIEEMDFPR 120
  121 LIKLSLPNIK EGVDIVTCGT LEYYDKTYDR INVKNEKPLQ KIDRIVHTVT TTDDPVIRRL 180
  181 SKTVGNVFAT DAILATIMCS TRSN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [269-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSWDIVIEKV GDKVFMDKRD HTEFDLLTVN ESSVEPPTDD DSSCNSPRNL AIEATFINHN  60
   61 FSQQVLKTGD QEPKYKFEES NPFISEDEDI QVASVGYRYK KWEL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [373-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSDIVLVARC EHDGVLQTPS GEPQFMTIKA LNEWDSKLAN GVEWRQKLDT QRGAVLANEL  60
   61 RNNACKLAKW TVQAVLAGSD QLKLGYVSRI 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [463-560]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPRDHSRHVI LGTQQFKPHE FATQINLSMD NAWGILRCII DLVMKQKDGK YLIMKDPNKP  60
   61 IIRLYDIPDN TFDSDDSDDG EGDDEGFQQV YNYAHNKI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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