| Protein: | cdc16-PA |
| Organism: | Drosophila melanogaster |
| Length: | 718 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdc16-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
452.0 | [0..2] | [716..94] |
|
Region A: Residues: [1-525] |
1 11 21 31 41 51
| | | | | |
1 MPGDTENTST DTTNEHIDLA LYRQLVKQFI DMRRYSTALF WAEKVAVLGG LEPRDIYYQA 60
61 QCMYLLGEYH RAAHTIQHHK LEKNSLPCFN LLLESLYAAK EFTEAANVIQ NVEVEVMTTS 120
121 LINQPVDASS GCYLESNSVF GGEENHRNEL LSSIYLMKGK VYEALDNRGM AMDFYVQALH 180
181 KSIYCFEALE ALVQHEMLMA WEEFELMHHL PLAQQSSEAD AKFILKLYES RLKKYYELIS 240
241 ARNAEEMSPI VNPDILQFIK EFTARVQQSG SSDTQMPKVS AVKVPLTPSQ FMSPAQKVLE 300
301 DLKAPTFSLQ TSLSKASSLI DASHRSMFDS SSRRRSRDHD TDTLIPIAEC LDRVQRSTDL 360
361 MAAEAEKCFY DCDYKQCLKI LNELLKVDPF HNTALTIQIA CLVENGDFNR LFYVAHKLVD 420
421 RYPDKAISWY AVGCYYDMIG KSDPARRYLS KATALDRLYG PAWLAYGHSF ANENEHEQAM 480
481 AAYFKATQLM RGCHLPLLYI GVECGLTKNL ELAEKFFLQA MNIAP
|
| Detection Method: |  |
| Confidence: | 31.30103 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
|
Region A: Residues: [526-571] |
1 11 21 31 41 51
| | | | | |
1 LDVYVLHELG VIKYEYEFFD GAATIFQCTV DIVKQRAKSN NEEISS
|
| Detection Method: | |
| Confidence: | 4.154902 |
| Match: | 1b89A |
| Description: | Clathrin heavy chain proximal leg segment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [572-718] |
1 11 21 31 41 51
| | | | | |
1 RWEPLFINLG HSLRKVHKYE EALYNFQYAL LLKPQSPTTY TSIGFIHALL GNLDPAIEAF 60
61 HKSLALNRDC IVTSTILKSC IEDLMDDSAT IDEICSAALR DVAKNITANS RRVLNSDKFN 120
121 GMKLKFDEEE EFANSDSNMV VEMSFDT
|
| Detection Method: | |
| Confidence: | 67.69897 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
