| Protein: | EloA-PA |
| Organism: | Drosophila melanogaster |
| Length: | 643 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EloA-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
225.0 | [0..1] | [643..1] |
|
Region A: Residues: [1-176] |
1 11 21 31 41 51
| | | | | |
1 MASTSNLLDV VRHYQRSIEK HGEDEQRLLH CITKLFNLPI KFEHLQETGI GKTVNALRKI 60
61 SGEVGVAAKT LVTKWKAMVA KEDPSIASTP TAIHNEEDSG KTKSSDEDPD QENKGGNSSS 120
121 GEDLNTSKHK SKHAKSTKHE RSSSSRSHSK SRSDSDKKHK SSRHDKSKDR DKDREG
|
| Detection Method: |  |
| Confidence: | 2.46 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [177-420] |
1 11 21 31 41 51
| | | | | |
1 QKEAKEHKEK KSNGEHKSKD SSKSSSSHKS SKSESHKSEH TKSKHEKDKT SHSELKEVKD 60
61 KSSKHKSSSS KSSKRSHSPP RHEEESQKAK IPKVKSKSEE DSADGFDSSM GANFDDVLGL 120
121 LNIPISSKKS SSNSKSKFVA KPTAAPSSSA LSAPTTAGSS KEALSTSSRP TSKKPELLAS 180
181 TAKLEPLDPN IALELPTISN NYKPMPLNQT VMDVVFNQGG SHKAQASRYF NESEALAQGI 240
241 SSKT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [421-559] |
1 11 21 31 41 51
| | | | | |
1 MRTKIYSGVR TGQILQVPSL FDLCTRVLQK NIDALEYTGG VPFEVLRPVL ERATPQQLLN 60
61 FEEYNPYLMD DSDVLWQQHV QRHCRSQRRE EMETWREMFL RCQEEKDRKL SILAESIKAS 120
121 QKISEAPVRK TQLAFVDSM
|
| Detection Method: | |
| Confidence: | 81.853872 |
| Match: | PF06881.2 |
| Description: | No description for PF06881.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [560-643] |
1 11 21 31 41 51
| | | | | |
1 VKPPRSVQRK QEQYGTKGKL IATPAARVAA LSSVTPNAAK VGDARLRVLA AARDTAQVGA 60
61 GPARSKKAPL MAKTLQFMRG RLKR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
