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View Structure Prediction Details

Protein: Cby-PB
Organism: Drosophila melanogaster
Length: 100 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cby-PB.

Description E-value Query
Range
Subject
Range
gi|66770989, gi|... - gi|85815855|ref|NP_650989.2| Chibby CG13415-PA [Drosophila melanogaster], gi|84796183|gb|AAF55929.2|...
164.0 [0..1] [100..26]
gi|55246663, gi|... - gi|58384224|ref|XP_313122.2| ENSANGP00000023456 [Anopheles gambiae str. PEST], gi|58375447|ref|XP_30...
145.0 [0..1] [95..1]
gi|148224433, gi... - gi|21666368|gb|AAM73680.1| leucine-rich protein [Xenopus laevis], gi|148224433|ref|NP_001082262.1| l...
139.0 [0..1] [95..1]
CBY1_RAT - Protein chibby homolog 1 OS=Rattus norvegicus GN=Cby1 PE=1 SV=1
138.0 [0..1] [95..1]
CBY1_MOUSE - Protein chibby homolog 1 OS=Mus musculus GN=Cby1 PE=1 SV=1
138.0 [0..1] [95..1]
gi|213624050, gi... - gi|62858941|ref|NP_001016253.1| chibby homolog 1 [Xenopus (Silurana) tropicalis], gi|213627007|gb|AA...
136.0 [0..1] [95..1]
gi|21666370, gi|... - gi|51467901|ref|NP_001003838.1| leucine-rich protein [Danio rerio], gi|21666370|gb|AAM73681.1| leuci...
132.0 [0..1] [95..1]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLFNKKFES KPIPVRQGRC NIGHPVATED LDDFRQISLT LGNKELRFAD GIWMHSTRKG  60
   61 DVDDMLRLNK KFRALEEENN MCNLKIEVML DLLAERDGTK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.863 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.863 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.790 d.300.1 Description not found.
View Download 0.785 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.735 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.735 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.726 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.714 a.24.17 Group V grass pollen allergen
View Download 0.623 d.199.1 DNA-binding C-terminal domain of the transcription factor MotA
View Download 0.574 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain


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