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View Structure Prediction Details

Protein: Gr93a-PA
Organism: Drosophila melanogaster
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr93a-PA.

Description E-value Query
Range
Subject
Range
gi|125773781, gi... - gi|54637884|gb|EAL27286.1| GA12269-PA [Drosophila pseudoobscura], gi|125773781|ref|XP_001358149.1| G...
161.0 [0..13] [419..1]

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Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSSSAMTG KRAESWSRLL LLWLYRCARG LLVLSSSLDR DKLQLKATKQ GSRNRFLHIL  60
   61 WRCIVVMIYA GLWPMLTSAV IGKRLESYAD VLALAQSMSV SILAVISFVI QARGENQFRE 120
  121 VLNRYLALYQ RICLTTRLRH LFPTKFVVFF LLKLFFTLCG CFHEIIPLFE NSHFDDISQM 180
  181 VGTGFGIYMW LGTLCVLDAC FLGFLVSGIL YEHMANNIIA MLKRMEPIES QDERYR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [237-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKYRRMQLL CDFADELDEC AAIYSELYHV TNSFRRILQW QILFYIYLNF INICLMLYQY  60
   61 ILHFLNDDEV VFVSIVMAFV KLANLVLLMM CADYTVRQSE VPKKLPLDIV CSDMDERWDK 120
  121 SVETFLGQLQ TQRLEIKVLG FFHLNNEFIL LILSAIISYL FILIQFGITG GFEASEDIKN 180
  181 RFD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle