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View Structure Prediction Details

Protein: Gr93a-PA
Organism: Drosophila melanogaster
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr93a-PA.

Description E-value Query
Range
Subject
Range
gi|125773781, gi... - gi|54637884|gb|EAL27286.1| GA12269-PA [Drosophila pseudoobscura], gi|125773781|ref|XP_001358149.1| G...
161.0 [0..13] [419..1]

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Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSSSAMTG KRAESWSRLL LLWLYRCARG LLVLSSSLDR DKLQLKATKQ GSRNRFLHIL  60
   61 WRCIVVMIYA GLWPMLTSAV IGKRLESYAD VLALAQSMSV SILAVISFVI QARGENQFRE 120
  121 VLNRYLALYQ RICLTTRLRH LFPTKFVVFF LLKLFFTLCG CFHEIIPLFE NSHFDDISQM 180
  181 VGTGFGIYMW LGTLCVLDAC FLGFLVSGIL YEHMANNIIA MLKRMEPIES QDERYR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [237-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKYRRMQLL CDFADELDEC AAIYSELYHV TNSFRRILQW QILFYIYLNF INICLMLYQY  60
   61 ILHFLNDDEV VFVSIVMAFV KLANLVLLMM CADYTVRQSE VPKKLPLDIV CSDMDERWDK 120
  121 SVETFLGQLQ TQRLEIKVLG FFHLNNEFIL LILSAIISYL FILIQFGITG GFEASEDIKN 180
  181 RFD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle