Protein: | CG42668-PD |
Organism: | Drosophila melanogaster |
Length: | 625 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG42668-PD.
Description | E-value | Query Range |
Subject Range |
|
749.0 | [0..1] | [625..1] |
Region A: Residues: [1-81] |
1 11 21 31 41 51 | | | | | | 1 MVYPSAKYPL QYSAFVPVRQ AGNYTLIFAR FRLLKKYLDA DSQNEAPNAV MSGLESESES 60 61 DPAEPAQDDV VDQQCVETSY V |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [82-450] |
1 11 21 31 41 51 | | | | | | 1 PFTEEEFGEQ GEQVEELAEE NKSLIWCIVK QVRPGMDLSK VVLPTFILEP RSFLDKLSDS 60 61 YYHADLLSKA VQEDDAFTRM KLVVQWYLSS FYKKPKGLKK PYNPILGERF RCYWQHPSGS 120 121 RTFYIAEQVS HHPPVSAFYV TNREDGFSIT CSILAKSKFY GNSTSAVLEG AATMTLLPRG 180 181 ECYTATTPYA HCKGILMGTL SMELGGKINI ECENTGYRTE LEFKLKPFLG GADATNVVVG 240 241 KIKLGKETLA TINGHWDKEC RVKDSKTGEE TVLFKVDAET RSKRLTRYMV PLDLQEANES 300 301 QRLWQRVSEA IANEDQVAAT EEKTVLEERQ RADAKERLSS DSVHMPDLFE LDSYGQWLYK 360 361 YADLRPWDS |
Detection Method: | |
Confidence: | 78.154902 |
Match: | 1zhtA |
Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
sterol binding | 3.12877992228795 | bayes_pls_golite062009 |
steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
binding | 1.67154210149282 | bayes_pls_golite062009 |
lipid binding | 1.46539100663772 | bayes_pls_golite062009 |
oxysterol binding | 1.1738554488982 | bayes_pls_golite062009 |
phospholipid binding | 0.0867097353003303 | bayes_pls_golite062009 |
Region A: Residues: [451-625] |
1 11 21 31 41 51 | | | | | | 1 RNDVRQYECQ FKVLTQTRHK SVPIVHGAEM IHPLRSSIET LSRTQRQSPA GQPLPPGGSA 60 61 VPKAKNKSLV LAPRDTNSDS SQSPQGAVKR SSSSAIKQLA LAVDQVNRVL EQHTRQLNEI 120 121 SQRLERMQYS PPPSSMSAHS LHMLGGGVSQ STVIKSLIYA LIGLAFSLIL RWLFK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.