YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Hs6st-PA, FBpp03...
Organism: Drosophila melanogaster
Length: 462 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Hs6st-PA, FBpp03....

Description E-value Query
Range
Subject
Range
gi|58396131, gi|... - gi|58396131|ref|XP_321686.2| ENSANGP00000015201 [Anopheles gambiae str. PEST], gi|55233905|gb|EAA017...
472.0 [0..4] [462..5]

Back

Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGDMHKNVS VQVDSDFALL LPSGVYEIKK MEPRSKIRTI IVFCLFLAIA GIIGFGYFCQ  60
   61 DQVCALSKRA VILQSSDILA YNELPLHQAN SINGNANGNS NGNGNSVGGI TAMASKSSAP 120
  121 QNIIANAGLS YEDVLNDDFQ FD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGHDVMVFL HIQKTGGTSF GRHLVRDLDL KRPCECQRQR KRCYCFRPHR NENWLFSRYS  60
   61 TGWKCGLHAD WTELTSCVDV ELDKNEGETA KRRYFYISLL RQPIARYMSE YRHVRRGATW 120
  121 KGSRHWCLGR QATAAELPAC YKGKDWLDVD LDQFAGCESN LAANRQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 1cjmA
Description: Aryl sulfotransferase sult1a3
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [309-462]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRMLADLALV GCYNKSSMPA HERDRVMLAS AKRNLAAMAY FGLTEYQKMS QYIFEETFNL  60
   61 RFAIPFEQHN TTISATAVQN LRPDQKRRIE KLNSLDIELY AFAKTLLFQR FEHLKAKDTN 120
  121 FEQRYANLGN IYFKQGVTEF NWDSNVEDGL STDH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle