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View Structure Prediction Details

Protein: gi|23171757, gi|...
Organism: Drosophila melanogaster
Length: 980 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23171757, gi|....

Description E-value Query
Range
Subject
Range
gi|125777791, gi... - gi|54639478|gb|EAL28880.1| GA18391-PA [Drosophila pseudoobscura], gi|125777791|ref|XP_001359728.1| G...
730.0 [0..22] [980..21]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQANSSTTTT TTTTKTKKLS SGTGTNMISS VAVTSAIKTT TTTRKPAGSG VSSKVSKAQG  60
   61 ATNSTPASSD SNAEIAE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTKKINDHAD AIYHTWKSQG IPPTELLTMY TSAAASGDLA DVASPTADAE GLQKMVTSFV  60
   61 NKDKEQRGKS NTLKKSDITT ANGKVKKAAV SSFSPVPDQA LQSPKKVAAV TVSKPLPDVN 120
  121 LNYDISLDLD VNNLSSQQTQ NLLKISELIQ QQKDVAATVG KKRQNSKANS SSSINSNHIG 180
  181 NSASSNKLTA SEQPTKKQSK ANSSGSTRTG SAAVSLDVVD GPSAARIANS TAVSD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [313-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGGEPAATGS RKSSKTKETS ADSKPATKEK PTAVATVANA RKSTSRIATD NAGNMAAATA  60
   61 AAAATSATSA ATATSMDATP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [393-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATAASTTMPT LNKVKPTSGA RAALANGQDK SNTLEMNPIY SSALAIQISV STSSESPHPW  60
   61 LRGRARAHVR EVSGCAARLP QHQTAPDGSS AQESHEGKGR IYVDMGVAVC GFWGES

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [509-598]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKKFPHKRKQ SQIFENKLHI LLSCALAAKT RECKQLVSEI HFRIHIRRQV KLHATPPPPP  60
   61 QEQNLLQKEI RSTKSVYIPR FYFPHGKPQP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [599-688]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NIAMERVVRG ILSAFDSFPN NQVTKDELPR ILKICGLPFY WRMPVMVFCQ SASTGLVERQ  60
   61 RFVEFWKQMN VYCHEAASRF VYILSRGQRF 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.17
Match: 1k96A
Description: Calcyclin (S100)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.778872331808332 bayes_pls_golite062009

Predicted Domain #7
Region A:
Residues: [689-898]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSYIVPEDLV PMVQDVVDTH PGLAFLKEAT EFHSRYVHTV IARIFYSVNR SWSGKITIAE  60
   61 LKRSDLLEMI SLLEEEEDIN QIMAFFSYEH FYVIYCKFWE LDKDHDLLIN QEDLAKHSDH 120
  121 ALSSRIVERI FSGCVTRSDN KKAPEDEAKM SYTDFVWFIL SEEDKRTPTA IEYWFRCMDV 180
  181 DGDGVLSMYE LEYFYEEQQQ RMEGIGIECL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.154902
Match: 2f33A
Description: No description for 2f33A was found.

Predicted Domain #8
Region A:
Residues: [899-980]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFEDCLCQML DMIKPANRDC ITLGDLKRCK MTHVFFDTFF NLEKYLDHEQ RDPFASQRDE  60
   61 YTSDWDRFAA QEYELLISEE ND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle