| Protein: | Ino80-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1638 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ino80-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
819.0 | [0..1] | [1638..1] |
|
Region A: Residues: [1-332] |
1 11 21 31 41 51
| | | | | |
1 MEAKPVPAPQ PRPRAMAEPL HIQRLEAALN MRPFMNMAKR SLRKPLSSDE ETDDEHVVKR 60
61 EHDVQDSDDS STVGVVRMKQ SSKRKSRLLA SKEERQSVKA QLYNFNDLTS DREWLYDLLL 120
121 SDTESDDPTI TEDEYVQQLL REHVREQRQR KNYYKKAANA QYAYYGSGLL SNHDIFAERQ 180
181 LATAGVRKRR RRTKQEILMA RLAEAQAGPK PPKQRRRGRK KRDNMGSPES GEVPPSELGK 240
241 YTFGDTLPNN EDDDEDGGEV DYKRELASLA LDYPEEEEIE EEVDVEGGTE GQVTKVRRKR 300
301 KNPAALAARR RRIWQIMSKK ESGRLQRIKS NN
|
| Detection Method: |  |
| Confidence: | 14.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [333-523] |
1 11 21 31 41 51
| | | | | |
1 HKEMLANCKR VAGMCAKVVR QRAINSQRIM KETVWRAKRL TREMLAYWKR YERVERDQRR 60
61 KQEREAEEQR KQDVELIEVK RQQRKLNFLI TQTELYAHFM SKKLGQGSEE DQLRILSQLD 120
121 EETNARLAAQ DDYDAGEMKL LAQENAEAAM QRDLDKTRAF DVFAKKKEKE EEEQAQESVE 180
181 DIKPEPRPEM K
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [524-1073] |
1 11 21 31 41 51
| | | | | |
1 DLPQPKMFKG TLKGYQIKGM TWLANIYDQG ISGILADEMG LGKTVQSIAF LCHIAEHYGV 60
61 WGPFLVISPA STLHNWQQEM SRFVPDFKVV PYWGSPAERK ILRQFWDQKH LHTRDASFHV 120
121 VITSYQLVVS DYKYFNRIKW QYMVLDEAQA IKSAASQRWK LLLGFSCRNR LLLSGTPIQN 180
181 SMAELWALLH FIMPTLFDSH DEFNEWFSKD IESHAENKTG IDEKQISRLH MILKPFMLRR 240
241 IKKDVENELS DKIEIMVYCP LTIRQKLLYR ALKQKIRIED LLHLTSGSTT TSSSSSASNL 300
301 MNLVMQFRKV CNHPELFERR DARSPFFMRC AEYTIPRLIH EEGLIHRMLP SRKHLLYNRF 360
361 NIFKSEYIQR SLFEDVNVNS CFGFTRLCDL SVGDMVEVTL NGLIDFLLHY RRVLEKYPLL 420
421 AYRRFWWKKQ PDSRYQLLEP MLENKLALDY MPPNSVLKNF IFTAMTANES SVYAFGDYFT 480
481 YNMQETIEHR VIRSKILKKK TSLIEEMEDV SKQKLEIESV EVQTKSNAKS DVKVTTLLLL 540
541 PEFPHRPRKP
|
| Detection Method: | |
| Confidence: | 91.221849 |
| Match: | 1z63A |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1074-1280] |
1 11 21 31 41 51
| | | | | |
1 RKYVCEPLSM PRILYDLGQK VQAVHRYLYC DSRSAAWSQI RHNQCENSQG RELVSSGLAL 60
61 CKPHGGWSSI VVPDKETLIT DAGKLFVLDN LLTRLKANGH RVLIYSQMTK MIDLLEEYMW 120
121 HRKHRYMRLD GSSKISARRD MVADFQTRAD IFVFLLSTRA GGLGINLTAA DTVIFYDSDW 180
181 NPTVDQQAMD RAHRLGQTKQ VTVYRLI
|
| Detection Method: | |
| Confidence: | 46.39794 |
| Match: | 1z5zA |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1281-1638] |
1 11 21 31 41 51
| | | | | |
1 CKGTIEERIL QRAREKSEIQ RMVISGGNFK PDTLKPKEVV SLLLDDEEIE MKYRQEAKLQ 60
61 SSSPIPAATQ SERKRRHPQK DVNMGGTTIA ATSATQNPDD DVPSCSSAAK RIKLETEEDF 120
121 IDVGITSSAS SVGTDSNHPT LSQETYVPGA TCVQQTEIDS ENEALVVDGD SPTMLGQNES 180
181 MNFLDDLSGI SPMRRRHHPR GTRRGRPRGS TRRGGGHGSI PRVLTPTQAA TPAVPATASQ 240
241 AAAAGTGAAA GTSSPLPQQE VSGGGDNAGV PLHEEEYRTS PSGQSPGVSC KRGPGRPRSK 300
301 TATPISRGTR GAPRARRPMG PLLVPLGRSP DDTPPSSSPA TSRAPSPLSG SHGAVGPE
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
