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View Structure Prediction Details

Protein: FBpp0310950, sr-PB
Organism: Drosophila melanogaster
Length: 906 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310950, sr-PB.

Description E-value Query
Range
Subject
Range
gi|73948425 - gi|73948425|ref|XP_541659.2| PREDICTED: similar to zinc finger protein 91 (HPF7, HTF10) [Canis famil...
755.0 [0..219] [905..522]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMEGLETLV APTHHAFLLT ETAAAAHFNV LSFDTCLFKT STAAQSSGSP STATYLSPAQ  60
   61 FGGSHHGGAS TSSNSLNSSS TASSSSTSSS LLHYTTASAA AAAAAAAAAS ANNSVLRARN 120
  121 QTATPTQGGS PGHVAVQPSA TASSGRSSAS HLSLLNTSGQ HSPTSSAVEQ VEAHKQLIEA 180
  181 LPGDLNTPVT TSSDIPSFFG PTTVVEPPPI TGSIESEDLS LEPQVISVAS PVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHCSPLKEER STPPALAIVK EESSNNSCNM YPQHNNNNNN NNNTTSSSTT TTSKQTTSES  60
   61 NTECVGSPGN HTQSHQQQQQ QLQHNNTSSS NSNCHHSHQQ QQQQQQQQHM SSPQQQYQQH 120
  121 QILHQQQQLP NHHHHHHHHH HHHSQLQQLQ QQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [386-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQQQQQQQQH QQQPLHQQQQ LQHQQQQQHH QQHYQQHAIQ HQQSQQQASK ISYRGIFTTT  60
   61 GNAMNAAAAA AAAAAQQQHQ QQQQHQQQLP SPQLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [481-601]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLAGPMSPPS NSLGNSWGLP SPDKTMFQPP LFSLPAHYAT MQQQQQQQQQ QQQQQQQQQA  60
   61 AGAAPSPYDD GRAAAAAAAQ HAELLGLTMD CTPLLLKQPP PSYAGASAGF PGLGDLHSSH 120
  121 E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [602-677]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQLQQQQYVR SQPKYQWLDS PADYAQQQQQ VQQVQQQQQQ QQTLVLPGPT SSASSSNAAL  60
   61 GVLIPKQENY PDMQPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [678-906]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNGTGYSGGS GGSSAAAAAA AAAAAAAVQL AEYSPSTSKG HEILSQVYQQ STVPLKLVPV  60
   61 KPRKYPNRPS KTPVHERPYA CPVENCDRRF SRSDELTRHI RIHTGQKPFQ CRICMRSFSR 120
  121 SDHLTTHIRT HTGEKPFSCD ICGRKFARSD EKKRHAKVHL KQRIKKEKVR GEQQQQQQQQ 180
  181 QQQQQQQQQQ QLQQQQEQHH LSLQQHQQYQ QHHLLHSADL AIVTSSASM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.0
Match: 2i13A
Description: No description for 2i13A was found.

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