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View Structure Prediction Details

Protein: FBpp0310950, sr-PB
Organism: Drosophila melanogaster
Length: 906 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310950, sr-PB.

Description E-value Query
Range
Subject
Range
gi|73948425 - gi|73948425|ref|XP_541659.2| PREDICTED: similar to zinc finger protein 91 (HPF7, HTF10) [Canis famil...
755.0 [0..219] [905..522]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMEGLETLV APTHHAFLLT ETAAAAHFNV LSFDTCLFKT STAAQSSGSP STATYLSPAQ  60
   61 FGGSHHGGAS TSSNSLNSSS TASSSSTSSS LLHYTTASAA AAAAAAAAAS ANNSVLRARN 120
  121 QTATPTQGGS PGHVAVQPSA TASSGRSSAS HLSLLNTSGQ HSPTSSAVEQ VEAHKQLIEA 180
  181 LPGDLNTPVT TSSDIPSFFG PTTVVEPPPI TGSIESEDLS LEPQVISVAS PVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHCSPLKEER STPPALAIVK EESSNNSCNM YPQHNNNNNN NNNTTSSSTT TTSKQTTSES  60
   61 NTECVGSPGN HTQSHQQQQQ QLQHNNTSSS NSNCHHSHQQ QQQQQQQQHM SSPQQQYQQH 120
  121 QILHQQQQLP NHHHHHHHHH HHHSQLQQLQ QQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [386-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQQQQQQQQH QQQPLHQQQQ LQHQQQQQHH QQHYQQHAIQ HQQSQQQASK ISYRGIFTTT  60
   61 GNAMNAAAAA AAAAAQQQHQ QQQQHQQQLP SPQLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [481-601]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLAGPMSPPS NSLGNSWGLP SPDKTMFQPP LFSLPAHYAT MQQQQQQQQQ QQQQQQQQQA  60
   61 AGAAPSPYDD GRAAAAAAAQ HAELLGLTMD CTPLLLKQPP PSYAGASAGF PGLGDLHSSH 120
  121 E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [602-677]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQLQQQQYVR SQPKYQWLDS PADYAQQQQQ VQQVQQQQQQ QQTLVLPGPT SSASSSNAAL  60
   61 GVLIPKQENY PDMQPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [678-906]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNGTGYSGGS GGSSAAAAAA AAAAAAAVQL AEYSPSTSKG HEILSQVYQQ STVPLKLVPV  60
   61 KPRKYPNRPS KTPVHERPYA CPVENCDRRF SRSDELTRHI RIHTGQKPFQ CRICMRSFSR 120
  121 SDHLTTHIRT HTGEKPFSCD ICGRKFARSD EKKRHAKVHL KQRIKKEKVR GEQQQQQQQQ 180
  181 QQQQQQQQQQ QLQQQQEQHH LSLQQHQQYQ QHHLLHSADL AIVTSSASM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.0
Match: 2i13A
Description: No description for 2i13A was found.

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Created and Maintained by: Michael Riffle